RNA–Protein interactions for RNA: ENST00000317702.9

TUBB6-201, Transcript of tubulin beta 6 class V, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB6, Length 2,064 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-201ENST00000317702 SAMD15Q9P1V8 674 aa29.79■■■□□ 2.36
TUBB6-201ENST00000317702 ACTL7BQ9Y614 415 aa29.79■■■□□ 2.36
TUBB6-201ENST00000317702 GOLGA6L7A0A1B0GV03 622 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 EXOC1LA0A1B0GW35 172 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 PCK1P35558 622 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 ACTN3Q08043 901 aaPredicted RBP29.78■■■□□ 2.36
TUBB6-201ENST00000317702 PDE4CQ08493 712 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 TAF5Q15542 800 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 FAM183BPQ6ZVS7 135 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 UNC93AQ86WB7 457 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 RFX6Q8HWS3 928 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 ANKS4BQ8N8V4 417 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 PIWIL1Q96J94 861 aaKnown RBP29.78■■■□□ 2.36
TUBB6-201ENST00000317702 HHIPL1Q96JK4 782 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 MIS12Q9H081 205 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 FARP1Q9Y4F1 1045 aaPredicted RBP29.78■■■□□ 2.36
TUBB6-201ENST00000317702 ALOX15BO15296 676 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 ADAMTS4O75173 837 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 RARBP10826 455 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 FGFR1P11362 822 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 RGS7P49802 495 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 GDF10P55107 478 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 SRRM1Q8IYB3 904 aaKnown RBP29.78■■■□□ 2.36
TUBB6-201ENST00000317702 CCDC13Q8IYE1 715 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 ANKRD42Q8N9B4 389 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 P3H4Q92791 437 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 ZNF560Q96MR9 790 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 TSPAN18Q96SJ8 248 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 SPC25Q9HBM1 224 aa29.78■■■□□ 2.36
TUBB6-201ENST00000317702 TMEM88BA6NKF7 163 aa29.77■■■□□ 2.36
TUBB6-201ENST00000317702 KPNA7A9QM74 516 aa29.77■■■□□ 2.36
TUBB6-201ENST00000317702 M0QZ92 97 aa29.77■■■□□ 2.36
TUBB6-201ENST00000317702 XPOTO43592 962 aaKnown RBP29.77■■■□□ 2.36
TUBB6-201ENST00000317702 GPD1P21695 349 aa29.77■■■□□ 2.36
TUBB6-201ENST00000317702 NKX3-2P78367 333 aa29.77■■■□□ 2.36
TUBB6-201ENST00000317702 FAM47CQ5HY64 1035 aa29.77■■■□□ 2.36
TUBB6-201ENST00000317702 OR6B2Q6IFH4 312 aa29.77■■■□□ 2.36
TUBB6-201ENST00000317702 CNPY3Q9BT09 278 aa29.77■■■□□ 2.36
TUBB6-201ENST00000317702 C10orf88Q9H8K7 445 aa29.77■■■□□ 2.36
TUBB6-201ENST00000317702 A8MXQ7 604 aa29.76■■■□□ 2.36
TUBB6-201ENST00000317702 APOC4-APOC2K7ER74 178 aa29.76■■■□□ 2.36
TUBB6-201ENST00000317702 APOC2P02655 101 aa29.76■■■□□ 2.36
TUBB6-201ENST00000317702 CTSHP09668 335 aa29.76■■■□□ 2.36
TUBB6-201ENST00000317702 CTCFP49711 727 aaPredicted RBP29.76■■■□□ 2.36
TUBB6-201ENST00000317702 MPP2Q14168 576 aa29.76■■■□□ 2.36
TUBB6-201ENST00000317702 ITIH4Q14624 930 aa29.76■■■□□ 2.36
TUBB6-201ENST00000317702 TRNP1Q6NT89 227 aa29.76■■■□□ 2.36
TUBB6-201ENST00000317702 PMF1Q6P1K2 205 aa29.76■■■□□ 2.36
TUBB6-201ENST00000317702 ZBED8Q8IZ13 594 aa29.76■■■□□ 2.36
TUBB6-201ENST00000317702 RSAD2Q8WXG1 361 aa29.76■■■□□ 2.36
TUBB6-201ENST00000317702 ACTR5Q9H9F9 607 aaPredicted RBP29.76■■■□□ 2.36
TUBB6-201ENST00000317702 GDAP2Q9NXN4 497 aa29.76■■■□□ 2.36
TUBB6-201ENST00000317702 ST3GAL5Q9UNP4 418 aa29.76■■■□□ 2.36
TUBB6-201ENST00000317702 PTGESO14684 152 aa29.76■■■□□ 2.35
TUBB6-201ENST00000317702 TMED2Q15363 201 aa29.76■■■□□ 2.35
TUBB6-201ENST00000317702 HP1BP3Q5SSJ5 553 aaPredicted RBP29.76■■■□□ 2.35
TUBB6-201ENST00000317702 ZNF618Q5T7W0 954 aa29.76■■■□□ 2.35
TUBB6-201ENST00000317702 TAX1BP1Q86VP1 789 aa29.76■■■□□ 2.35
TUBB6-201ENST00000317702 TDRPQ86YL5 185 aa29.76■■■□□ 2.35
TUBB6-201ENST00000317702 PPIL6Q8IXY8 311 aa29.76■■■□□ 2.35
TUBB6-201ENST00000317702 MAML1Q92585 1016 aa29.76■■■□□ 2.35
TUBB6-201ENST00000317702 PEBP4Q96S96 227 aa29.76■■■□□ 2.35
TUBB6-201ENST00000317702 ELAC2Q9BQ52 826 aaKnown RBP29.76■■■□□ 2.35
TUBB6-201ENST00000317702 CALN1Q9BXU9 219 aa29.76■■■□□ 2.35
TUBB6-201ENST00000317702 RSAD1Q9HA92 442 aa29.76■■■□□ 2.35
TUBB6-201ENST00000317702 C2CD4BA6NLJ0 364 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 CHRNA1P02708 482 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 GCAP28676 217 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 CCND3P30281 292 aaPredicted RBP29.75■■■□□ 2.35
TUBB6-201ENST00000317702 TAF6P49848 677 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 PDIA2Q13087 525 aaKnown RBP29.75■■■□□ 2.35
TUBB6-201ENST00000317702 SERINC5Q86VE9 423 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 RXFP2Q8WXD0 754 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 CCT6BQ92526 530 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 SENP6Q9GZR1 1112 aaPredicted RBP29.75■■■□□ 2.35
TUBB6-201ENST00000317702 VPS37BQ9H9H4 285 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 MEIS3P2A8K0S8 358 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 ALDH1A1P00352 501 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 RDXP35241 583 aaKnown RBP29.75■■■□□ 2.35
TUBB6-201ENST00000317702 PNPLA4P41247 253 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 NR1H3Q13133 447 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 HIF1AQ16665 826 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 ANKRD20A8PQ5CZ79 823 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 ARHGAP17Q68EM7 881 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 LIMS2Q7Z4I7 341 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 XPNPEP3Q9NQH7 507 aa29.75■■■□□ 2.35
TUBB6-201ENST00000317702 RASA4BC9J798 803 aa29.74■■■□□ 2.35
TUBB6-201ENST00000317702 H0YHG0 523 aa29.74■■■□□ 2.35
TUBB6-201ENST00000317702 RASA4O43374 803 aa29.74■■■□□ 2.35
TUBB6-201ENST00000317702 PDGFRBP09619 1106 aa29.74■■■□□ 2.35
TUBB6-201ENST00000317702 PDGFRAP16234 1089 aa29.74■■■□□ 2.35
TUBB6-201ENST00000317702 LMO2P25791 158 aa29.74■■■□□ 2.35
TUBB6-201ENST00000317702 SH3PXD2AQ5TCZ1 1133 aa29.74■■■□□ 2.35
TUBB6-201ENST00000317702 RSPH3Q86UC2 560 aa29.74■■■□□ 2.35
TUBB6-201ENST00000317702 CKAP2Q8WWK9 683 aa29.74■■■□□ 2.35
TUBB6-201ENST00000317702 CPT1BQ92523 772 aa29.74■■■□□ 2.35
TUBB6-201ENST00000317702 ZFP42Q96MM3 310 aa29.74■■■□□ 2.35
TUBB6-201ENST00000317702 SLC4A5Q9BY07 1137 aa29.74■■■□□ 2.35
TUBB6-201ENST00000317702 PHACTR1Q9C0D0 580 aa29.74■■■□□ 2.35
TUBB6-201ENST00000317702 KDM4CQ9H3R0 1056 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms