RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 ACO1P21399 889 aaKnown RBP13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 SERPINB9P50453 376 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 BST2Q10589 180 aaKnown RBP13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 CNGA2Q16280 664 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 ANKRD20A8PQ5CZ79 823 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 NLGN2Q8NFZ4 835 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 AGR3Q8TD06 166 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 WWP1Q9H0M0 922 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 DDIT4Q9NX09 232 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 TMEM59LQ9UK28 342 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 COL22A1Q8NFW1 1626 aaPredicted RBP13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 hCG_1818297A0A087WSY0 165 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 PMM2O15305 246 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 MYCP01106 439 aaPredicted RBP13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 CYP2F1P24903 491 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 PTPN20Q4JDL3 420 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 MAP3K21Q5TCX8 1036 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 KDELC2Q7Z4H8 507 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 JOSD2Q8TAC2 188 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 KDM4CQ9H3R0 1056 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 GBA2Q9HCG7 927 aaPredicted RBP13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 CYB561D2O14569 222 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 SHOX2O60902 331 aaPredicted RBP13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 LUC7L3O95232 432 aaKnown RBP13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 PCSK1P29120 753 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 PEX5P50542 639 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 MMEL1Q495T6 779 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 EXOC3L1Q86VI1 746 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 ALLCQ8N6M5 410 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 SNCAIPQ9Y6H5 919 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 TNRC6CQ9HCJ0 1690 aaKnown RBP13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 KPNA7A9QM74 516 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 AP1G2O75843 785 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 ACAT1P24752 427 aaKnown RBP13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 KPNA2P52292 529 aaKnown RBP13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 HIRAP54198 1017 aaPredicted RBP13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 STX3Q13277 289 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 MDH1BQ5I0G3 518 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 FBXL18Q96ME1 805 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 VCX3BQ9H321 246 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 BCAP29Q9UHQ4 241 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 RECQL4O94761 1208 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 SETSIPP0DME0 302 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 UNGP13051 313 aaPredicted RBP13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 ARF4P18085 180 aaPredicted RBP13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 PTGIRP43119 386 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 C4orf22Q6V702 233 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 HIPK4Q8NE63 616 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 RAB3IL1Q8TBN0 382 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 FAM161BQ96MY7 647 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 LBHD1Q9BQE6 289 aaPredicted RBP13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 PIAS1O75925 651 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 TARSP26639 723 aaKnown RBP13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 GRIK1P39086 918 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 ACVR2BQ13705 512 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 PAN2Q504Q3 1202 aaKnown RBP13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 CCNYL1Q8N7R7 359 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 LMO3Q8TAP4 145 aa13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 DDX27Q96GQ7 796 aaKnown RBP13.93□□□□□ -0.18
PCDHB9-201ENST00000316105 KBTBD13C9JR72 458 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 CYP1A1P04798 512 aaPredicted RBP13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 PAMP19021 973 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 EPHB2P29323 1055 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 ERFP50548 548 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 KDSRQ06136 332 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 ACAP1Q15027 740 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 NPNTQ6UXI9 565 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 RFX8Q6ZV50 586 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 ZNF410Q86VK4 478 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 RYBPQ8N488 228 aaPredicted RBP13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 ATXN2LQ8WWM7 1075 aaKnown RBP13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 ZNF669Q96BR6 464 aaPredicted RBP13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 CENPTQ96BT3 561 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 DRG1Q9Y295 367 aaKnown RBP13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 BANF1O75531 89 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 VNN1O95497 513 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 KIAA1841Q6NSI8 718 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 PACS2Q86VP3 889 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 C12orf29Q8N999 325 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 VPS39Q96JC1 886 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 TBCBQ99426 244 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 RNPEPQ9H4A4 650 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 B3GAT3O94766 335 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 ALDH18A1P54886 795 aaKnown RBP13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 SLC6A3Q01959 620 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 MMRN1Q13201 1228 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 NT5DC4Q86YG4 428 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 SPATA2LQ8IUW3 424 aaPredicted RBP13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 SLC2A14Q8TDB8 520 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 E2F7Q96AV8 911 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 HDAC11Q96DB2 347 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 CD248Q9HCU0 757 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 GRHL1Q9NZI5 618 aa13.92□□□□□ -0.18
PCDHB9-201ENST00000316105 SPDYE5A6NIY4 337 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 CFLARO15519 480 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 B4GALT4O60513 344 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 CCDC22O60826 627 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 ENO1P06733 434 aaKnown RBP13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 POLBP06746 335 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 PYGBP11216 843 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms