RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 GAD2Q05329 585 aa13.43□□□□□ -0.26
CKS2-201ENST00000314355 SPOPLQ6IQ16 392 aa13.43□□□□□ -0.26
CKS2-201ENST00000314355 CACNA2D4Q7Z3S7 1137 aa13.43□□□□□ -0.26
CKS2-201ENST00000314355 FILIP1Q7Z7B0 1213 aa13.43□□□□□ -0.26
CKS2-201ENST00000314355 FBXL13Q8NEE6 735 aa13.43□□□□□ -0.26
CKS2-201ENST00000314355 RPLP0P6Q8NHW5 317 aa13.43□□□□□ -0.26
CKS2-201ENST00000314355 CHFRQ96EP1 664 aa13.43□□□□□ -0.26
CKS2-201ENST00000314355 CHAMP1Q96JM3 812 aa13.43□□□□□ -0.26
CKS2-201ENST00000314355 HEXIM2Q96MH2 286 aaKnown RBP13.43□□□□□ -0.26
CKS2-201ENST00000314355 PNKPQ96T60 521 aa13.43□□□□□ -0.26
CKS2-201ENST00000314355 FAM49BQ9NUQ9 324 aa13.43□□□□□ -0.26
CKS2-201ENST00000314355 LSM7Q9UK45 103 aaKnown RBP13.43□□□□□ -0.26
CKS2-201ENST00000314355 CDV3Q9UKY7 258 aaKnown RBP13.43□□□□□ -0.26
CKS2-201ENST00000314355 PATJQ8NI35 1801 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 ZBTB24O43167 697 aaPredicted RBP13.42□□□□□ -0.26
CKS2-201ENST00000314355 HRO43593 1189 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 RPP40O75818 363 aaKnown RBP13.42□□□□□ -0.26
CKS2-201ENST00000314355 ALDH1A2O94788 518 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 OAS1P00973 400 aaKnown RBP13.42□□□□□ -0.26
CKS2-201ENST00000314355 TRIM49P0CI25 452 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 TRIM49CP0CI26 452 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 CCDC130P13994 396 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 CD58P19256 250 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 ATP5C1P36542 298 aaKnown RBP13.42□□□□□ -0.26
CKS2-201ENST00000314355 CACNA2D1P54289 1103 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 YWHAEP62258 255 aaKnown RBP13.42□□□□□ -0.26
CKS2-201ENST00000314355 FKBP3Q00688 224 aaKnown RBP13.42□□□□□ -0.26
CKS2-201ENST00000314355 SPEM2Q0P670 501 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 CETN1Q12798 172 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 PNOCQ13519 176 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 DHCR24Q15392 516 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 ZNF658Q5TYW1 1059 aaPredicted RBP13.42□□□□□ -0.26
CKS2-201ENST00000314355 SNX30Q5VWJ9 437 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 SYT13Q7L8C5 426 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 FUKQ8N0W3 1084 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 SCAMP5Q8TAC9 235 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 HNRNPABQ99729 332 aaKnown RBP13.42□□□□□ -0.26
CKS2-201ENST00000314355 NIF3L1Q9GZT8 377 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 SDCBP2Q9H190 292 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 GOLPH3LQ9H4A5 285 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.42□□□□□ -0.26
CKS2-201ENST00000314355 RAB20Q9NX57 234 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 NME7Q9Y5B8 376 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 PCDHA5Q9Y5H7 936 aa13.42□□□□□ -0.26
CKS2-201ENST00000314355 EP300Q09472 2414 aaPredicted RBP13.41□□□□□ -0.26
CKS2-201ENST00000314355 FANCMQ8IYD8 2048 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 AXIN1O15169 862 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 COCHO43405 550 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 RHOBTB1O94844 696 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 APBB3O95704 486 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 OLFM2O95897 454 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 RALAP11233 206 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 ACO1P21399 889 aaKnown RBP13.41□□□□□ -0.26
CKS2-201ENST00000314355 EIF2DP41214 584 aaKnown RBP13.41□□□□□ -0.26
CKS2-201ENST00000314355 ASPAP45381 313 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 PSEN1P49768 467 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 MXI1P50539 228 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 MRPS21P82921 87 aaKnown RBP13.41□□□□□ -0.26
CKS2-201ENST00000314355 DMC1Q14565 340 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 RSPO4Q2I0M5 234 aaPredicted RBP13.41□□□□□ -0.26
CKS2-201ENST00000314355 ANO4Q32M45 955 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 USP39Q53GS9 565 aaKnown RBP13.41□□□□□ -0.26
CKS2-201ENST00000314355 DCAF17Q5H9S7 520 aaPredicted RBP13.41□□□□□ -0.26
CKS2-201ENST00000314355 PAQR9Q6ZVX9 377 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 C11orf74Q86VG3 221 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 C12orf29Q8N999 325 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 TSTD1Q8NFU3 115 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 TAS1R2Q8TE23 839 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 GAB3Q8WWW8 586 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 ELMO3Q96BJ8 720 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 RMDN1Q96DB5 314 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 LOXL4Q96JB6 756 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 TIGD1Q96MW7 591 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 CDK5RAP1Q96SZ6 601 aaKnown RBP13.41□□□□□ -0.26
CKS2-201ENST00000314355 FAM124BQ9H5Z6 455 aaPredicted RBP13.41□□□□□ -0.26
CKS2-201ENST00000314355 FBRSL1Q9HCM7 1045 aaKnown RBP13.41□□□□□ -0.26
CKS2-201ENST00000314355 CSNK1G1Q9HCP0 422 aa13.41□□□□□ -0.26
CKS2-201ENST00000314355 TBC1D3BA6NDS4 549 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 TNFRSF10BO14763 440 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 PSMA7O14818 248 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 TLR5O60602 858 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 ADH5P11766 374 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 GRIA2P42262 883 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 PXNP49023 591 aaPredicted RBP13.4□□□□□ -0.26
CKS2-201ENST00000314355 DGKEP52429 567 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 SEC13P55735 322 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 LRRC63Q05C16 580 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 PPP3CAQ08209 521 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 DMWDQ09019 674 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 INCA1Q0VD86 236 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 ORC1Q13415 861 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 ELF2Q15723 593 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 HSF5Q4G112 596 aaPredicted RBP13.4□□□□□ -0.26
CKS2-201ENST00000314355 ZNF394Q53GI3 561 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 C2orf27AQ580R0 203 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 SDE2Q6IQ49 451 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 C12orf50Q8NA57 414 aaPredicted RBP13.4□□□□□ -0.26
CKS2-201ENST00000314355 RIN3Q8TB24 985 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 JAKMIP2Q96AA8 810 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 XPO6Q96QU8 1125 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms