RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 HEY1Q9Y5J3 304 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 TKTP29401 623 aaKnown RBP12.99□□□□□ -0.33
RNF4-201ENST00000314289 MLH1P40692 756 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 ANKRD22Q5VYY1 191 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 GDF6Q6KF10 455 aaPredicted RBP12.99□□□□□ -0.33
RNF4-201ENST00000314289 OLFML1Q6UWY5 402 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 CYP4V2Q6ZWL3 525 aaPredicted RBP12.99□□□□□ -0.33
RNF4-201ENST00000314289 FUKQ8N0W3 1084 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 TLCD1Q96CP7 247 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 ACTR5Q9H9F9 607 aaPredicted RBP12.99□□□□□ -0.33
RNF4-201ENST00000314289 ZFYVE28Q9HCC9 887 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 CDY2AQ9Y6F7 541 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 PRPSAP2O60256 369 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 CHN1P15882 459 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 ELF1P32519 619 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 PREPLQ4J6C6 727 aaPredicted RBP12.99□□□□□ -0.33
RNF4-201ENST00000314289 HIBCHQ6NVY1 386 aaPredicted RBP12.99□□□□□ -0.33
RNF4-201ENST00000314289 SYDE1Q6ZW31 735 aaPredicted RBP12.99□□□□□ -0.33
RNF4-201ENST00000314289 POLNQ7Z5Q5 900 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 CTU1Q7Z7A3 348 aaKnown RBP12.99□□□□□ -0.33
RNF4-201ENST00000314289 NT5DC4Q86YG4 428 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 CYP4X1Q8N118 509 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 SPATA18Q8TC71 538 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 FNIP1Q8TF40 1166 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 SLC35F5Q8WV83 523 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 KHSRPQ92945 711 aaKnown RBP eCLIP12.99□□□□□ -0.33
RNF4-201ENST00000314289 SNX25Q9H3E2 840 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 MCM8Q9UJA3 840 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 TCRBV7S3A2A0A539 114 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 PIRO00625 290 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 PTGESO14684 152 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 AKR1A1P14550 325 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 SCTRP47872 440 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 FLT3LGP49771 235 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 EP400NLQ6ZTU2 488 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 APPL2Q8NEU8 664 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 GAD1Q99259 594 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 PAAF1Q9BRP4 392 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 CNPY3Q9BT09 278 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 TPX2Q9ULW0 747 aaKnown RBP12.98□□□□□ -0.33
RNF4-201ENST00000314289 NR2E3Q9Y5X4 410 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 I3L4J1 428 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 BEST1O76090 585 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 MAGEA4P43358 317 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 CRYBB1P53674 252 aaPredicted RBP12.98□□□□□ -0.33
RNF4-201ENST00000314289 LILRA4P59901 499 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 EIF3EP60228 445 aaKnown RBP12.98□□□□□ -0.33
RNF4-201ENST00000314289 COPS2P61201 443 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 KRT81Q14533 505 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 PKDCCQ504Y2 493 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 TRMT10CQ7L0Y3 403 aaKnown RBP12.98□□□□□ -0.33
RNF4-201ENST00000314289 APBB1IPQ7Z5R6 666 aaPredicted RBP12.98□□□□□ -0.33
RNF4-201ENST00000314289 OSTM1Q86WC4 334 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 ZBED8Q8IZ13 594 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 SLC35B2Q8TB61 432 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 RSAD2Q8WXG1 361 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 MAK16Q9BXY0 300 aaKnown RBP12.98□□□□□ -0.33
RNF4-201ENST00000314289 TMPRSS4Q9NRS4 437 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 ST3GAL5Q9UNP4 418 aa12.98□□□□□ -0.33
RNF4-201ENST00000314289 DNALI1O14645 258 aaPredicted RBP12.97□□□□□ -0.33
RNF4-201ENST00000314289 RBP3P10745 1247 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 ELNP15502 786 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 SDC4P31431 198 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 GKAP1Q5VSY0 366 aaPredicted RBP12.97□□□□□ -0.33
RNF4-201ENST00000314289 WSCD1Q658N2 575 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 ADGRF2Q8IZF7 708 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 LRRC52Q8N7C0 313 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 CMASQ8NFW8 434 aaPredicted RBP12.97□□□□□ -0.33
RNF4-201ENST00000314289 TBC1D31Q96DN5 1066 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 DONSONQ9NYP3 566 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 CTCFP49711 727 aaPredicted RBP12.97□□□□□ -0.33
RNF4-201ENST00000314289 NDUFV1P49821 464 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 TAF6P49848 677 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 BASP1P80723 227 aaKnown RBP12.97□□□□□ -0.33
RNF4-201ENST00000314289 SLC6A3Q01959 620 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 C6orf118Q5T5N4 469 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 FAXCQ5TGI0 409 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 BBS12Q6ZW61 710 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 EXOC3L1Q86VI1 746 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 KIRREL3Q8IZU9 778 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 ANKRD42Q8N9B4 389 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 HASPINQ8TF76 798 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 FAM149B1Q96BN6 582 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 PGM2Q96G03 612 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 SGSM3Q96HU1 749 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 MIOSQ9NXC5 875 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 GGA2Q9UJY4 613 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 CASTOR2A6NHX0 329 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 F5H423 210 aaPredicted RBP12.97□□□□□ -0.33
RNF4-201ENST00000314289 POC1B-GALNT4F8VUJ3 575 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 HUS1O60921 280 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 STAU1O95793 577 aaKnown RBP12.97□□□□□ -0.33
RNF4-201ENST00000314289 RPSAP08865 295 aaKnown RBP12.97□□□□□ -0.33
RNF4-201ENST00000314289 PITX1P78337 314 aaPredicted RBP12.97□□□□□ -0.33
RNF4-201ENST00000314289 CDC42EP1Q00587 391 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 PRKCZQ05513 592 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 PDIA2Q13087 525 aaKnown RBP12.97□□□□□ -0.33
RNF4-201ENST00000314289 DPYSL3Q14195 570 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 SPDYCQ5MJ68 293 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 TAX1BP1Q86VP1 789 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms