RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 EXT2Q93063 718 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 ATXN7L3BQ96GX2 97 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 TRIM56Q9BRZ2 755 aaKnown RBP14.22□□□□□ -0.13
DDX54-202ENST00000314045 SENP1Q9P0U3 644 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 TAF1P21675 1872 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 ZSCAN5CA6NGD5 496 aaPredicted RBP14.22□□□□□ -0.13
DDX54-202ENST00000314045 SIGLEC16A6NMB1 481 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 GOLGA8RI6L899 631 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 NEMP1O14524 444 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 PCSK7Q16549 785 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 LDLRAD1Q5T700 205 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 ADAM32Q8TC27 787 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 TRABDQ9H4I3 376 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 CYP4F11Q9HBI6 524 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 GIT1Q9Y2X7 761 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 FARP1Q9Y4F1 1045 aaPredicted RBP14.22□□□□□ -0.13
DDX54-202ENST00000314045 ARHGAP42A6NI28 874 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 CYP1A2P05177 515 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 CKMP06732 381 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 HSD17B3P37058 310 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 ERMARDQ5T6L9 678 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 C12orf29Q8N999 325 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 NPLOC4Q8TAT6 608 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 HDAC7Q8WUI4 952 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 PPM1EQ8WY54 764 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 BHMTQ93088 406 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 HSFY1Q96LI6 401 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 PABPC3Q9H361 631 aaKnown RBP14.22□□□□□ -0.13
DDX54-202ENST00000314045 FZD8Q9H461 694 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 MARF1Q9Y4F3 1742 aaKnown RBP14.21□□□□□ -0.13
DDX54-202ENST00000314045 PDE2AO00408 941 aaPredicted RBP14.21□□□□□ -0.13
DDX54-202ENST00000314045 CES2O00748 559 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 IKBKEQ14164 716 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 RCN2Q14257 317 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 NOMO2Q5JPE7 1267 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 PIGZQ86VD9 579 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 RASSF3Q86WH2 238 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 B3GALNT2Q8NCR0 500 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 MRPS31Q92665 395 aaKnown RBP14.21□□□□□ -0.13
DDX54-202ENST00000314045 FAM129AQ9BZQ8 928 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 ANKZF1Q9H8Y5 726 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 CHST12Q9NRB3 414 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 PADI3Q9ULW8 664 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 POU5F1BQ06416 359 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 ACAP1Q15027 740 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 SLC39A12Q504Y0 691 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 PHF13Q86YI8 300 aaPredicted RBP14.21□□□□□ -0.13
DDX54-202ENST00000314045 C1orf127Q8N9H9 656 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 FTHL17Q9BXU8 183 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 FUT8Q9BYC5 575 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 FRMD8Q9BZ67 464 aaPredicted RBP14.21□□□□□ -0.13
DDX54-202ENST00000314045 TTYH3Q9C0H2 523 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 FBXO44Q9H4M3 255 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 GOLGA2P5Q9HBQ8 144 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 RRN3Q9NYV6 651 aa14.21□□□□□ -0.13
DDX54-202ENST00000314045 GMNCA6NCL1 334 aa14.21□□□□□ -0.14
DDX54-202ENST00000314045 CYP2F1P24903 491 aa14.21□□□□□ -0.14
DDX54-202ENST00000314045 ZFP42Q96MM3 310 aa14.21□□□□□ -0.14
DDX54-202ENST00000314045 PCDHB18PQ96TA0 734 aa14.21□□□□□ -0.14
DDX54-202ENST00000314045 LMCD1Q9NZU5 365 aa14.21□□□□□ -0.14
DDX54-202ENST00000314045 MORF4L1Q9UBU8 362 aa14.21□□□□□ -0.14
DDX54-202ENST00000314045 PCDHB12Q9Y5F1 795 aa14.21□□□□□ -0.14
DDX54-202ENST00000314045 ZNF263O14978 683 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 LTFP02788 710 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 RPL9P32969 192 aaKnown RBP14.2□□□□□ -0.14
DDX54-202ENST00000314045 ETFBP38117 255 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 VCPP55072 806 aaKnown RBP14.2□□□□□ -0.14
DDX54-202ENST00000314045 GUCY1A3Q02108 690 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 ZNF449Q6P9G9 518 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 CRLF3Q8IUI8 442 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 XAB2Q9HCS7 855 aaKnown RBP14.2□□□□□ -0.14
DDX54-202ENST00000314045 TJP1Q07157 1748 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 UBA6A0AVT1 1052 aaPredicted RBP14.2□□□□□ -0.14
DDX54-202ENST00000314045 PMPCBO75439 489 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 RPL7AP62424 266 aaKnown RBP14.2□□□□□ -0.14
DDX54-202ENST00000314045 ANKRD52Q8NB46 1076 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 TTC8Q8TAM2 541 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 MAML1Q92585 1016 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 TUBGCP4Q9UGJ1 667 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 SPAG6O75602 509 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 HSPA4LO95757 839 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 USP17L7P0C7H9 530 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 NPR3P17342 541 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 CCR1P32246 355 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 C15orf59Q2T9L4 293 aaPredicted RBP14.2□□□□□ -0.14
DDX54-202ENST00000314045 PPHLN1Q8NEY8 458 aaKnown RBP14.2□□□□□ -0.14
DDX54-202ENST00000314045 EIF2AQ9BY44 585 aaKnown RBP14.2□□□□□ -0.14
DDX54-202ENST00000314045 DCLK3Q9C098 648 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 WHRNQ9P202 907 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 BTNL10A8MVZ5 291 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 LGR5O75473 907 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 ZNF792Q3KQV3 632 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 C9orf57Q5W0N0 161 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 WDR75Q8IWA0 830 aaKnown RBP14.2□□□□□ -0.14
DDX54-202ENST00000314045 SARS2Q9NP81 518 aaKnown RBP14.2□□□□□ -0.14
DDX54-202ENST00000314045 PRDM4Q9UKN5 801 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 G3BP2Q9UN86 482 aaKnown RBP14.2□□□□□ -0.14
DDX54-202ENST00000314045 DERAQ9Y315 318 aa14.2□□□□□ -0.14
DDX54-202ENST00000314045 JCHAINP01591 159 aa14.19□□□□□ -0.14
DDX54-202ENST00000314045 RARGP13631 454 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms