RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 NFICP08651 508 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 GTF2H1P32780 548 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 CCNI2Q6ZMN8 369 aaPredicted RBP15.98■□□□□ 0.15
HCFC1-201ENST00000310441 CLYBLQ8N0X4 340 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 SCUBE2Q9NQ36 999 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 PIM2Q9P1W9 311 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 DYRK1BQ9Y463 629 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 H7C4K7 107 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 MZF1P28698 734 aaPredicted RBP15.98■□□□□ 0.15
HCFC1-201ENST00000310441 TDRD10Q5VZ19 366 aaKnown RBP15.98■□□□□ 0.15
HCFC1-201ENST00000310441 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.98■□□□□ 0.15
HCFC1-201ENST00000310441 DYNC1LI2O43237 492 aaPredicted RBP15.98■□□□□ 0.15
HCFC1-201ENST00000310441 TOB2Q14106 344 aaPredicted RBP15.98■□□□□ 0.15
HCFC1-201ENST00000310441 FBXO42Q6P3S6 717 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 GLB1LQ6UWU2 654 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 MACC1Q6ZN28 852 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 A0A087WWV3 80 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 GNG14A0A1W2PPG7 69 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 TARSP26639 723 aaKnown RBP15.97■□□□□ 0.15
HCFC1-201ENST00000310441 IRAK1BP1Q5VVH5 260 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 KDELC2Q7Z4H8 507 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 CHSY1Q86X52 802 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 ATP8B4Q8TF62 1192 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 ZBTB39O15060 712 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 TTKP33981 857 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 USP38Q8NB14 1042 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 DBR1Q9UK59 544 aaKnown RBP15.97■□□□□ 0.15
HCFC1-201ENST00000310441 PADI4Q9UM07 663 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 CDHR2Q9BYE9 1310 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 EGFRP00533 1210 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 HPCAL1P37235 193 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 ALFQ53S48 1182 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 PCNX4Q63HM2 1172 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 CPA5Q8WXQ8 436 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 TMEM117Q9H0C3 514 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 EPB41L4BQ9H329 900 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 GTF2A1LQ9UNN4 478 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 ITGA8P53708 1063 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 GALCP54803 685 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 NEK5Q6P3R8 708 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 CLEC17AQ6ZS10 378 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 WDR24Q96S15 920 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 SLC40A1Q9NP59 571 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 FASP25445 335 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 UGT2B28Q9BY64 529 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 CPT1AP50416 773 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 AMPD2Q01433 879 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 CDC16Q13042 620 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 ATG16L2Q8NAA4 619 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 PABPC3Q9H361 631 aaKnown RBP15.97■□□□□ 0.15
HCFC1-201ENST00000310441 RXFP1Q9HBX9 757 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 TAGLN3Q9UI15 199 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 ANKRD6Q9Y2G4 727 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 EPHX4Q8IUS5 362 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 CD302Q8IX05 232 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 MS4A14Q96JA4 679 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 NIF3L1Q9GZT8 377 aa15.97■□□□□ 0.15
HCFC1-201ENST00000310441 F9P00740 461 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 FAM58BPP0C7Q3 252 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 NCAM1P13591 858 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 NQO1P15559 274 aaKnown RBP15.96■□□□□ 0.15
HCFC1-201ENST00000310441 GEMP55040 296 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 SH3BP5LQ7L8J4 393 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 RORBQ92753 470 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.96■□□□□ 0.152e-7■■□□□ 12.3
HCFC1-201ENST00000310441 HOXB6P17509 224 aaKnown RBP15.96■□□□□ 0.15
HCFC1-201ENST00000310441 TRAF2Q12933 501 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 MZT2BQ6NZ67 158 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 OXCT2Q9BYC2 517 aaPredicted RBP15.96■□□□□ 0.15
HCFC1-201ENST00000310441 PCDHB7Q9Y5E2 793 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 ATP6V1B2P21281 511 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 RDM1Q8NG50 284 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 KIAA1257Q9ULG3 409 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 GMEB1Q9Y692 573 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 PXDNLA1KZ92 1463 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 CHD1O14646 1710 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 RRN3P2A6NIE6 340 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 SPIRE2Q8WWL2 714 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 TEX13BQ9BXU2 312 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 RPS6KL1Q9Y6S9 549 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 NR3C2P08235 984 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 KYQ8NBH2 561 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 ASB2Q96Q27 587 aa15.96■□□□□ 0.15
HCFC1-201ENST00000310441 EFCAB10A6NFE3 127 aa15.96■□□□□ 0.14
HCFC1-201ENST00000310441 SERPINB5P36952 375 aa15.96■□□□□ 0.14
HCFC1-201ENST00000310441 CACTIN-AS1Q8N1I8 211 aa15.96■□□□□ 0.14
HCFC1-201ENST00000310441 RBBP8NLQ8NC74 664 aaPredicted RBP15.96■□□□□ 0.14
HCFC1-201ENST00000310441 RACGAP1Q9H0H5 632 aa15.96■□□□□ 0.14
HCFC1-201ENST00000310441 CPDO75976 1380 aa15.96■□□□□ 0.14
HCFC1-201ENST00000310441 TSC22D2O75157 780 aa15.96■□□□□ 0.14
HCFC1-201ENST00000310441 SNUPNO95149 360 aaKnown RBP15.96■□□□□ 0.14
HCFC1-201ENST00000310441 NR1I3Q14994 352 aa15.96■□□□□ 0.14
HCFC1-201ENST00000310441 LIN54Q6MZP7 749 aa15.96■□□□□ 0.14
HCFC1-201ENST00000310441 CYB5D1Q6P9G0 228 aa15.96■□□□□ 0.14
HCFC1-201ENST00000310441 FEZF2Q8TBJ5 459 aa15.96■□□□□ 0.14
HCFC1-201ENST00000310441 AP3S1Q92572 193 aa15.96■□□□□ 0.14
HCFC1-201ENST00000310441 ZNF669Q96BR6 464 aaPredicted RBP15.96■□□□□ 0.14
HCFC1-201ENST00000310441 SEC31BQ9NQW1 1179 aa15.96■□□□□ 0.14
HCFC1-201ENST00000310441 INTS13Q9NVM9 706 aa15.96■□□□□ 0.14
HCFC1-201ENST00000310441 AGAP1Q9UPQ3 857 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms