RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 GAREM2Q75VX8 874 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 TMEM110Q86TL2 294 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 ADHFE1Q8IWW8 467 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 ZNF276Q8N554 614 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 SCAMP5Q8TAC9 235 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 SHKBP1Q8TBC3 707 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 CPLX3Q8WVH0 158 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 GOLGA1Q92805 767 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 NXPE3Q969Y0 559 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 E2F7Q96AV8 911 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 PPP1R13BQ96KQ4 1090 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 AGPAT1Q99943 283 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 TASP1Q9H6P5 420 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 ST7Q9NRC1 585 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 EPS15L1Q9UBC2 864 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 AKR1B15C9JRZ8 316 aaPredicted RBP18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 MFAP3LO75121 409 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 MMEP08473 750 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 ZDHHC11BP0C7U3 371 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 NTHL1P78549 312 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 FMO1Q01740 532 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 ADIGQ0VDE8 80 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 TBX2Q13207 712 aaPredicted RBP18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 SLC5A9Q2M3M2 681 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 TJAP1Q5JTD0 557 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 TAF3Q5VWG9 929 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 MTSS1LQ765P7 747 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 GPRIN1Q7Z2K8 1008 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 NPAS3Q8IXF0 933 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 ZDHHC14Q8IZN3 488 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 C1orf131Q8NDD1 294 aaKnown RBP18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 FGF13Q92913 245 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 SLITRK6Q9H5Y7 841 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 SYNCQ9H7C4 482 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 CLIC5Q9NZA1 410 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 IMPACTQ9P2X3 320 aa18.83■□□□□ 0.6
SSSCA1-201ENST00000309328 ZNF840PA6NDX5 716 aa18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 ADCY5O95622 1261 aa18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 CYP1A1P04798 512 aaPredicted RBP18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 RALAP11233 206 aa18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 TNFAIP3P21580 790 aa18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 GBP2P32456 591 aaPredicted RBP18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 CCR2P41597 374 aa18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 NSFP46459 744 aaKnown RBP18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 NOMO3P69849 1222 aa18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 IFRD2Q12894 506 aaPredicted RBP18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 TDRD12Q587J7 1177 aaKnown RBP18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 KLHDC10Q6PID8 442 aa18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 TOGARAM2Q6ZUX3 1019 aa18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 BEND5Q7L4P6 421 aa18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 HAUS4Q9H6D7 363 aa18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 GRPEL1Q9HAV7 217 aa18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 ABHD10Q9NUJ1 306 aa18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 TMEM51Q9NW97 253 aa18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 STRIP2Q9ULQ0 834 aa18.82■□□□□ 0.6
SSSCA1-201ENST00000309328 TRAV19A0A0A6YYK7 116 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 TULP2O00295 520 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 MOSPD3O75425 235 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 CALCAP01258 141 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 GLI1P08151 1106 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 GZMAP12544 262 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 LAMP2P13473 410 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 BMP1P13497 986 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 IL9P15248 144 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 CEBPBP17676 345 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 SCNN1AP37088 669 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 AVPR1AP37288 418 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 RGS7P49802 495 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 MRE11P49959 708 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 KCNQ1P51787 676 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 CDK17Q00537 523 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 CENPCQ03188 943 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 TEAD2Q15562 447 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 HECTD3Q5T447 861 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 GPR158Q5T848 1215 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 TMEM150AQ86TG1 271 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 ERICH1Q86X53 443 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 PASD1Q8IV76 773 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 ITFG1Q8TB96 612 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 SLC20A1Q8WUM9 679 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 ANP32BQ92688 251 aaKnown RBP18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 TCEAL4Q96EI5 215 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 SYT11Q9BT88 431 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 ULBP1Q9BZM6 244 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 KIF9Q9HAQ2 790 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 TRPV4Q9HBA0 871 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 SEPT11Q9NVA2 429 aaKnown RBP18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 ASNSD1Q9NWL6 643 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 GMIPQ9P107 970 aa18.81■□□□□ 0.6
SSSCA1-201ENST00000309328 SSU72P8A0A1W2PR75 194 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 LOC730098B7Z3J9 87 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 TADA3O75528 432 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 USP17L7P0C7H9 530 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 UNGP13051 313 aaPredicted RBP18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 LCP1P13796 627 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 CHRNB2P17787 502 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 GABRB2P47870 512 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 DAOAP59103 153 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 ZNF268Q14587 947 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms