RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 HIC2Q96JB3 615 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 FETUBQ9UGM5 382 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 USP21Q9UK80 565 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 KCNN4O15554 427 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 FKBP6O75344 327 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 STK10O94804 968 aaKnown RBP11.6□□□□□ -0.55
PTPN7-201ENST00000309017 PYGLP06737 847 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 KDELR1P24390 212 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 CDK7P50613 346 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 PRKCEQ02156 737 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 KRT81Q14533 505 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 EFCAB3Q8N7B9 438 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 C17orf75Q9HAS0 396 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 FBXO40Q9UH90 709 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 ETV4P43268 484 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 HSD17B4P51659 736 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 ORC1Q13415 861 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 PGM5Q15124 567 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 BBS12Q6ZW61 710 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 JOSD2Q8TAC2 188 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 DTNBP1Q96EV8 351 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 EBF4Q9BQW3 602 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 CISHQ9NSE2 258 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 CLIC5Q9NZA1 410 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 COL16A1Q07092 1604 aaPredicted RBP11.59□□□□□ -0.55
PTPN7-201ENST00000309017 A0A0B4J269 797 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 F5H423 210 aaPredicted RBP11.59□□□□□ -0.55
PTPN7-201ENST00000309017 PIK3R2O00459 728 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 RNASEH1O60930 286 aaKnown RBP11.59□□□□□ -0.55
PTPN7-201ENST00000309017 PGM3O95394 542 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 CAP2P40123 477 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 DLGAP5Q15398 846 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 BSPRYQ5W0U4 402 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 NIPA1Q7RTP0 329 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 PPP4R1Q8TF05 950 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 DEPDC1BQ8WUY9 529 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 WDR83Q9BRX9 315 aaKnown RBP11.59□□□□□ -0.55
PTPN7-201ENST00000309017 SCAF8Q9UPN6 1271 aaKnown RBP11.59□□□□□ -0.55
PTPN7-201ENST00000309017 COL24A1Q17RW2 1714 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 ZNF862O60290 1169 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 ZBED1O96006 694 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 PSAPP07602 524 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 OSBPP22059 807 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 IL1R2P27930 398 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 RXRBP28702 533 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 MYL6P60660 151 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 OSTNP61366 133 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 TCHHL1Q5QJ38 904 aaPredicted RBP11.59□□□□□ -0.55
PTPN7-201ENST00000309017 SLFN12LQ6IEE8 588 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 DENND5BQ6ZUT9 1274 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 DHDDSQ86SQ9 333 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 SESTD1Q86VW0 696 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.59□□□□□ -0.55
PTPN7-201ENST00000309017 MZB1Q8WU39 189 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 LRRN4Q8WUT4 740 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 TMEM174Q8WUU8 243 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 UBE2OQ9C0C9 1292 aaKnown RBP11.59□□□□□ -0.55
PTPN7-201ENST00000309017 MTMR12Q9C0I1 747 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 DNAJC16Q9Y2G8 782 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 PLLPQ9Y342 182 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 TAF1LQ8IZX4 1826 aa11.59□□□□□ -0.55
PTPN7-201ENST00000309017 LRCH4O75427 683 aa11.58□□□□□ -0.55
PTPN7-201ENST00000309017 SPAG6O75602 509 aa11.58□□□□□ -0.55
PTPN7-201ENST00000309017 LDHAP00338 332 aaKnown RBP11.58□□□□□ -0.55
PTPN7-201ENST00000309017 COPAP53621 1224 aa11.58□□□□□ -0.55
PTPN7-201ENST00000309017 DEUP1Q05D60 604 aa11.58□□□□□ -0.55
PTPN7-201ENST00000309017 MMRN1Q13201 1228 aa11.58□□□□□ -0.55
PTPN7-201ENST00000309017 TAF5Q15542 800 aa11.58□□□□□ -0.55
PTPN7-201ENST00000309017 ICA1LQ8NDH6 482 aa11.58□□□□□ -0.55
PTPN7-201ENST00000309017 FAM81AQ8TBF8 368 aa11.58□□□□□ -0.55
PTPN7-201ENST00000309017 GDPD5Q8WTR4 605 aa11.58□□□□□ -0.55
PTPN7-201ENST00000309017 IFT43Q96FT9 208 aa11.58□□□□□ -0.55
PTPN7-201ENST00000309017 CGRRF1Q99675 332 aa11.58□□□□□ -0.55
PTPN7-201ENST00000309017 XAB2Q9HCS7 855 aaKnown RBP11.58□□□□□ -0.55
PTPN7-201ENST00000309017 CYP26B1Q9NR63 512 aa11.58□□□□□ -0.55
PTPN7-201ENST00000309017 ZNF541Q9H0D2 1346 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 A6NJR5 290 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 PFDN1O60925 122 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 PROCP04070 461 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 C15orf39Q6ZRI6 1047 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 SDCCAG8Q86SQ7 713 aaPredicted RBP11.58□□□□□ -0.56
PTPN7-201ENST00000309017 SPATA24Q86W54 205 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 THNSL1Q8IYQ7 743 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 PDCD2LQ9BRP1 358 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 DHRS4Q9BTZ2 278 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 KLHL4Q9C0H6 718 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 IL1RAPL1Q9NZN1 696 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 TJP2Q9UDY2 1190 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 MYH9P35579 1960 aaKnown RBP11.58□□□□□ -0.56
PTPN7-201ENST00000309017 ADAMTSL1Q8N6G6 1762 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 UGT1A9O60656 530 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 CST3P01034 146 aaPredicted RBP11.58□□□□□ -0.56
PTPN7-201ENST00000309017 DHRS4L1P0CG22 281 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 HIRAP54198 1017 aaPredicted RBP11.58□□□□□ -0.56
PTPN7-201ENST00000309017 RPL10AP62906 217 aaKnown RBP11.58□□□□□ -0.56
PTPN7-201ENST00000309017 SLC18A2Q05940 514 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 EMC2Q15006 297 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 ZNF699Q32M78 642 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 RALGPS1Q5JS13 557 aa11.58□□□□□ -0.56
PTPN7-201ENST00000309017 MYLK4Q86YV6 388 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms