RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 NT5C1AQ9BXI3 368 aa21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 RAB20Q9NX57 234 aa21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 PCDHGA2Q9Y5H1 932 aa21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 ATP8B3O60423 1300 aa21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 LMNAP02545 664 aaKnown RBP21■□□□□ 0.95
PDZRN3-202ENST00000308537 IFRD2Q12894 506 aaPredicted RBP21■□□□□ 0.95
PDZRN3-202ENST00000308537 LRRC32Q14392 662 aa21■□□□□ 0.95
PDZRN3-202ENST00000308537 KIAA1958Q8N8K9 716 aa21■□□□□ 0.95
PDZRN3-202ENST00000308537 FBXO32Q969P5 355 aa21■□□□□ 0.95
PDZRN3-202ENST00000308537 IMPG2Q9BZV3 1241 aa21■□□□□ 0.95
PDZRN3-202ENST00000308537 COMMD8Q9NX08 183 aa21■□□□□ 0.95
PDZRN3-202ENST00000308537 ZSCAN32Q9NX65 697 aa21■□□□□ 0.95
PDZRN3-202ENST00000308537 DUS2Q9NX74 493 aaKnown RBP21■□□□□ 0.95
PDZRN3-202ENST00000308537 CHORDC1Q9UHD1 332 aaPredicted RBP21■□□□□ 0.95
PDZRN3-202ENST00000308537 CPQQ9Y646 472 aa21■□□□□ 0.95
PDZRN3-202ENST00000308537 COCHO43405 550 aa20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 KINO60870 393 aaKnown RBP20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 CLSTN1O94985 981 aa20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 CD58P19256 250 aa20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 PDE6CP51160 858 aa20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 CCR3P51677 355 aa20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 MAP3K7CLP57077 242 aa20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 CC2D1AQ6P1N0 951 aaPredicted RBP20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 FOXR2Q6PJQ5 311 aa20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 ZC3H14Q6PJT7 736 aaKnown RBP20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 SYNPOQ8N3V7 929 aa20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 UBR7Q8N806 425 aa20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 CYFIP2Q96F07 1278 aa20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 DHTKD1Q96HY7 919 aaPredicted RBP20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 TSG101Q99816 390 aa20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 GTPBP4Q9BZE4 634 aaKnown RBP20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 GMIPQ9P107 970 aa20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 EML5Q05BV3 1969 aa20.99■□□□□ 0.95
PDZRN3-202ENST00000308537 EGFP01133 1207 aa20.98■□□□□ 0.95
PDZRN3-202ENST00000308537 ADORA2BP29275 332 aa20.98■□□□□ 0.95
PDZRN3-202ENST00000308537 TUBP50607 506 aa20.98■□□□□ 0.95
PDZRN3-202ENST00000308537 GALK1P51570 392 aa20.98■□□□□ 0.95
PDZRN3-202ENST00000308537 RAD23BP54727 409 aa20.98■□□□□ 0.95
PDZRN3-202ENST00000308537 DMWDQ09019 674 aa20.98■□□□□ 0.95
PDZRN3-202ENST00000308537 PPP1R26Q5T8A7 1209 aaPredicted RBP20.98■□□□□ 0.95
PDZRN3-202ENST00000308537 SLC4A11Q8NBS3 891 aa20.98■□□□□ 0.95
PDZRN3-202ENST00000308537 PDZD8Q8NEN9 1154 aa20.98■□□□□ 0.95
PDZRN3-202ENST00000308537 WBP2Q969T9 261 aa20.98■□□□□ 0.95
PDZRN3-202ENST00000308537 FAM126AQ9BYI3 521 aaPredicted RBP20.98■□□□□ 0.95
PDZRN3-202ENST00000308537 CCSER2Q9H7U1 834 aa20.98■□□□□ 0.95
PDZRN3-202ENST00000308537 CISHQ9NSE2 258 aa20.98■□□□□ 0.95
PDZRN3-202ENST00000308537 OSER1Q9NX31 292 aa20.98■□□□□ 0.95
PDZRN3-202ENST00000308537 SMPD4Q9NXE4 827 aa20.98■□□□□ 0.95
PDZRN3-202ENST00000308537 FAM200BP0CF97 657 aa20.97■□□□□ 0.95
PDZRN3-202ENST00000308537 CHRM1P11229 460 aaPredicted RBP20.97■□□□□ 0.95
PDZRN3-202ENST00000308537 OPRD1P41143 372 aa20.97■□□□□ 0.95
PDZRN3-202ENST00000308537 CXCL12P48061 93 aa20.97■□□□□ 0.95
PDZRN3-202ENST00000308537 IFNAR2P48551 515 aa20.97■□□□□ 0.95
PDZRN3-202ENST00000308537 DCAF17Q5H9S7 520 aaPredicted RBP20.97■□□□□ 0.95
PDZRN3-202ENST00000308537 CPA6Q8N4T0 437 aa20.97■□□□□ 0.95
PDZRN3-202ENST00000308537 ATP2A3Q93084 1043 aa20.97■□□□□ 0.95
PDZRN3-202ENST00000308537 EPC1Q9H2F5 836 aa20.97■□□□□ 0.95
PDZRN3-202ENST00000308537 PNPLA8Q9NP80 782 aa20.97■□□□□ 0.95
PDZRN3-202ENST00000308537 ARMCX3Q9UH62 379 aaPredicted RBP20.97■□□□□ 0.95
PDZRN3-202ENST00000308537 HOOK1Q9UJC3 728 aaKnown RBP20.97■□□□□ 0.95
PDZRN3-202ENST00000308537 PSMA7O14818 248 aa20.96■□□□□ 0.95
PDZRN3-202ENST00000308537 SCAMP3O14828 347 aaKnown RBP20.96■□□□□ 0.95
PDZRN3-202ENST00000308537 GREM1O60565 184 aa20.96■□□□□ 0.95
PDZRN3-202ENST00000308537 ABL1P00519 1130 aa20.96■□□□□ 0.95
PDZRN3-202ENST00000308537 CYP17A1P05093 508 aa20.96■□□□□ 0.95
PDZRN3-202ENST00000308537 ZNF394Q53GI3 561 aa20.96■□□□□ 0.95
PDZRN3-202ENST00000308537 FILIP1Q7Z7B0 1213 aa20.96■□□□□ 0.95
PDZRN3-202ENST00000308537 ADGRG2Q8IZP9 1017 aa20.96■□□□□ 0.95
PDZRN3-202ENST00000308537 LMO3Q8TAP4 145 aa20.96■□□□□ 0.95
PDZRN3-202ENST00000308537 CEP63Q96MT8 703 aa20.96■□□□□ 0.95
PDZRN3-202ENST00000308537 MED15Q96RN5 788 aa20.96■□□□□ 0.95
PDZRN3-202ENST00000308537 FAM124BQ9H5Z6 455 aaPredicted RBP20.96■□□□□ 0.95
PDZRN3-202ENST00000308537 NMUR1Q9HB89 426 aa20.96■□□□□ 0.95
PDZRN3-202ENST00000308537 MYO18AQ92614 2054 aaKnown RBP20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 SPAG17Q6Q759 2223 aa20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 SDK1Q7Z5N4 2213 aa20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 ANTXRLA6NF34 631 aa20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 PMM2O15305 246 aa20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 STX10O60499 249 aa20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 MBL2P11226 248 aaPredicted RBP20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 KIF11P52732 1056 aa20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 MESP2Q0VG99 397 aa20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 HECTD3Q5T447 861 aa20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 TCERG1LQ5VWI1 586 aa20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 TTC16Q8NEE8 873 aa20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 P2RY13Q9BPV8 354 aa20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 DUSP16Q9BY84 665 aa20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 CYLDQ9NQC7 956 aa20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 POLR3BQ9NW08 1133 aaPredicted RBP20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 CFAP97Q9P2B7 532 aa20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 SCML2Q9UQR0 700 aa20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 USP3Q9Y6I4 520 aa20.95■□□□□ 0.94
PDZRN3-202ENST00000308537 CACNA1AO00555 2505 aa20.94■□□□□ 0.94
PDZRN3-202ENST00000308537 CHURC1-FNTBB4DL54 471 aa20.94■□□□□ 0.94
PDZRN3-202ENST00000308537 BIN1O00499 593 aa20.94■□□□□ 0.94
PDZRN3-202ENST00000308537 CYP26A1O43174 497 aa20.94■□□□□ 0.94
PDZRN3-202ENST00000308537 HOXA6P31267 233 aa20.94■□□□□ 0.94
PDZRN3-202ENST00000308537 FMO5P49326 533 aa20.94■□□□□ 0.94
PDZRN3-202ENST00000308537 CUL2Q13617 745 aa20.94■□□□□ 0.94
PDZRN3-202ENST00000308537 ARHGAP17Q68EM7 881 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms