RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 GOLGA1Q92805 767 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 HSFY1Q96LI6 401 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 KCNK16Q96T55 309 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 COLEC11Q9BWP8 271 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 MIS12Q9H081 205 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 RAB6CQ9H0N0 254 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 CARD9Q9H257 536 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 IL23AQ9NPF7 189 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 CYLDQ9NQC7 956 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 RBM12Q9NTZ6 932 aaKnown RBP7.32□□□□□ -1.24
PTCD2-201ENST00000308077 RALYQ9UKM9 306 aaKnown RBP7.32□□□□□ -1.24
PTCD2-201ENST00000308077 SF3B1O75533 1304 aaKnown RBP eCLIP7.31□□□□□ -1.24
PTCD2-201ENST00000308077 TPRP12270 2363 aaKnown RBP7.31□□□□□ -1.24
PTCD2-201ENST00000308077 C2CD4BA6NLJ0 364 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 PGRMC1O00264 195 aaKnown RBP7.31□□□□□ -1.24
PTCD2-201ENST00000308077 SYN3O14994 580 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 TRAPPC3O43617 180 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 EFEMP2O95967 443 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 AMHP03971 560 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 BMP1P13497 986 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 FGFR3P22607 806 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 BDNFP23560 247 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 PAFAH1B1P43034 410 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 ACADSBP45954 432 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 NDUFV1P49821 464 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 ADCY1Q08828 1119 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 ADIGQ0VDE8 80 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 PIGHQ14442 188 aaPredicted RBP7.31□□□□□ -1.24
PTCD2-201ENST00000308077 ATP13A4Q4VNC1 1196 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 SH3PXD2AQ5TCZ1 1133 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 TXNRD3NBQ6F5E7 133 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 CC2D1AQ6P1N0 951 aaPredicted RBP7.31□□□□□ -1.24
PTCD2-201ENST00000308077 OTOP2Q7RTS6 562 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 TAS1R1Q7RTX1 841 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 CEP57Q86XR8 500 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.31□□□□□ -1.24
PTCD2-201ENST00000308077 RXFP2Q8WXD0 754 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 KCTD13Q8WZ19 329 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 ANKRD7Q92527 254 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 SMARCD1Q96GM5 515 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 RNPC3Q96LT9 517 aaKnown RBP7.31□□□□□ -1.24
PTCD2-201ENST00000308077 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.31□□□□□ -1.24
PTCD2-201ENST00000308077 VN1R3Q9BXE9 311 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 ADAM33Q9BZ11 813 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 ZCWPW1Q9H0M4 648 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 CSNK1G1Q9HCP0 422 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 RNF14Q9UBS8 474 aa7.31□□□□□ -1.24
PTCD2-201ENST00000308077 TTC7AQ9ULT0 858 aaPredicted RBP7.31□□□□□ -1.24
PTCD2-201ENST00000308077 COL4A4P53420 1690 aaPredicted RBP7.3□□□□□ -1.24
PTCD2-201ENST00000308077 PSTPIP1O43586 416 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 LRCH4O75427 683 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 GPD1P21695 349 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 IL1R2P27930 398 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 GJC1P36383 396 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 EPHB4P54760 987 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 RWDD2BP57060 319 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 TSPY1Q01534 308 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 SLC25A11Q02978 314 aaKnown RBP7.3□□□□□ -1.24
PTCD2-201ENST00000308077 ITIH3Q06033 890 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 C15orf59Q2T9L4 293 aaPredicted RBP7.3□□□□□ -1.24
PTCD2-201ENST00000308077 SLC39A12Q504Y0 691 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 RAB41Q5JT25 222 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 RTP2Q5QGT7 225 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 SLC26A9Q7LBE3 791 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 ANKS1BQ7Z6G8 1248 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 ZDHHC17Q8IUH5 632 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 RHOT1Q8IXI2 618 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 RNF168Q8IYW5 571 aaPredicted RBP7.3□□□□□ -1.24
PTCD2-201ENST00000308077 UBE2Q2Q8WVN8 375 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 UBXN4Q92575 508 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 BADQ92934 168 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 RPGRIP1Q96KN7 1286 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 CFAP57Q96MR6 1250 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 HERPUD2Q9BSE4 406 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 LCMT1Q9UIC8 334 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 NR2E1Q9Y466 385 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 COL4A3Q01955 1670 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 ACACBO00763 2458 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 MYO16Q9Y6X6 1858 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 TCRBV7S2A1N4TA0A589 114 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 DPYSL4O14531 572 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 TBC1D4O60343 1298 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 EFCAB14O75071 495 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 BAIAP3O94812 1187 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 FGGP02679 453 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 PDGFRAP16234 1089 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 TFE3P19532 575 aaPredicted RBP7.3□□□□□ -1.24
PTCD2-201ENST00000308077 CYP2F1P24903 491 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 SCNN1AP37088 669 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 SSR1P43307 286 aaKnown RBP7.3□□□□□ -1.24
PTCD2-201ENST00000308077 TKTL1P51854 596 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 ZNF143P52747 638 aaPredicted RBP7.3□□□□□ -1.24
PTCD2-201ENST00000308077 SLC8A3P57103 927 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 SNX16P57768 344 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 CCDC14Q49A88 953 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 CTXN3Q4LDR2 81 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 RSPO2Q6UXX9 243 aaPredicted RBP7.3□□□□□ -1.24
PTCD2-201ENST00000308077 HFE2Q6ZVN8 426 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 ZNF365Q70YC5 407 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 C7orf61Q8IZ16 206 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms