RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 SLC7A5P2Q9GIP4 190 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 DDX47Q9H0S4 455 aaKnown RBP9.63□□□□□ -0.87
PTPRE-202ENST00000306042 IRF2BPLQ9H1B7 796 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 XPNPEP1Q9NQW7 623 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 KRT37O76014 449 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 CYBAP13498 195 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 POU5F1BQ06416 359 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 NSUN2Q08J23 767 aaKnown RBP eCLIP9.63□□□□□ -0.87
PTPRE-202ENST00000306042 TMED2Q15363 201 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 DDR2Q16832 855 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 TAPT1Q6NXT6 567 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 GET4Q7L5D6 327 aaPredicted RBP9.63□□□□□ -0.87
PTPRE-202ENST00000306042 LGI2Q8N0V4 545 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 IPMKQ8NFU5 416 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 ARHGEF26Q96DR7 871 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 RAB6BQ9NRW1 208 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 MID2Q9UJV3 735 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 XIRP1Q702N8 1843 aaKnown RBP9.63□□□□□ -0.87
PTPRE-202ENST00000306042 CHKAP35790 457 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 SLC7A5Q01650 507 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 CUL1Q13616 776 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 CNGA2Q16280 664 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 MORN1Q5T089 497 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 TMEM63BQ5T3F8 832 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 C6orf118Q5T5N4 469 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 TIGD7Q6NT04 549 aaPredicted RBP9.63□□□□□ -0.87
PTPRE-202ENST00000306042 TC2NQ8N9U0 490 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 ADAM32Q8TC27 787 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 TSSK1BQ9BXA7 367 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 BRD9Q9H8M2 597 aa9.63□□□□□ -0.87
PTPRE-202ENST00000306042 NRAPQ86VF7 1730 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 SYN3O14994 580 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 KLRC4O43908 158 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 OR1E1P30953 314 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 CLCNKBP51801 687 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 CCDC6Q16204 474 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 BMT2Q1RMZ1 405 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 SYTL3Q4VX76 610 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 KCNT1Q5JUK3 1230 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 DSG4Q86SJ6 1040 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 FAM228AQ86W67 206 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 SLC25A41Q8N5S1 370 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 MBOAT7Q96N66 472 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.62□□□□□ -0.87
PTPRE-202ENST00000306042 GPATCH2LQ9NWQ4 482 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 PKP3Q9Y446 797 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 IQANK1A0A1B0GTG1 560 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 GRID2IPA4D2P6 1211 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 SNX2O60749 519 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 ZNF865P0CJ78 1059 aaPredicted RBP9.62□□□□□ -0.87
PTPRE-202ENST00000306042 CYP3A5P20815 502 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 SLC6A3Q01959 620 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 THEMIS2Q5TEJ8 643 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 SDHAF4Q5VUM1 108 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 SLC39A5Q6ZMH5 540 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 MFN1Q8IWA4 741 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 TTC8Q8TAM2 541 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 SUSD6Q92537 303 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 HSFY1Q96LI6 401 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 PRDM10Q9NQV6 1147 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 USP18Q9UMW8 372 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.62□□□□□ -0.87
PTPRE-202ENST00000306042 A0A1B0GUA9 196 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 E5RJQ4 531 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 CCL16O15467 120 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 RAMP2O60895 175 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 KRT38O76015 456 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 ACSL3O95573 720 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 CSF2RAP15509 400 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 ARL4DP49703 201 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 FNDC3BQ53EP0 1204 aaKnown RBP9.62□□□□□ -0.87
PTPRE-202ENST00000306042 KCNT2Q6UVM3 1135 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 TFB1MQ8WVM0 346 aaKnown RBP9.62□□□□□ -0.87
PTPRE-202ENST00000306042 MCOLN1Q9GZU1 580 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 STN1Q9H668 368 aaKnown RBP9.62□□□□□ -0.87
PTPRE-202ENST00000306042 ATP13A1Q9HD20 1204 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 AFF4Q9UHB7 1163 aaKnown RBP9.62□□□□□ -0.87
PTPRE-202ENST00000306042 FAM237AA0A1B0GTK4 181 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 GPC4O75487 556 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 ANXA9O76027 345 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 TROVE2P10155 538 aaKnown RBP eCLIP9.62□□□□□ -0.87
PTPRE-202ENST00000306042 RARGP13631 454 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 POLR2EP19388 210 aaKnown RBP9.62□□□□□ -0.87
PTPRE-202ENST00000306042 BYSLQ13895 437 aaKnown RBP9.62□□□□□ -0.87
PTPRE-202ENST00000306042 TFAP2DQ7Z6R9 452 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 PIGZQ86VD9 579 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 ANKRD52Q8NB46 1076 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 ATP11CQ8NB49 1132 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 ATAD1Q8NBU5 361 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 BADQ92934 168 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 CHMP6Q96FZ7 201 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 ZIC5Q96T25 663 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 BCAS3Q9H6U6 928 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 TBK1Q9UHD2 729 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 NCKAP1Q9Y2A7 1128 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 ABCA3Q99758 1704 aa9.62□□□□□ -0.87
PTPRE-202ENST00000306042 USP54Q70EL1 1684 aa9.61□□□□□ -0.87
PTPRE-202ENST00000306042 PLEKP08567 350 aaPredicted RBP9.61□□□□□ -0.87
PTPRE-202ENST00000306042 GTF2F1P35269 517 aaKnown RBP eCLIP9.61□□□□□ -0.87
PTPRE-202ENST00000306042 GLE1Q53GS7 698 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms