RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 EDF1O60869 148 aaKnown RBP13.77□□□□□ -0.2
DDX54-201ENST00000306014 SEC24DO94855 1032 aaPredicted RBP13.77□□□□□ -0.2
DDX54-201ENST00000306014 CXCL8P10145 99 aa13.77□□□□□ -0.2
DDX54-201ENST00000306014 PEX5P50542 639 aa13.77□□□□□ -0.2
DDX54-201ENST00000306014 NOMO3P69849 1222 aa13.77□□□□□ -0.2
DDX54-201ENST00000306014 RIPK1Q13546 671 aa13.77□□□□□ -0.2
DDX54-201ENST00000306014 PIGWQ7Z7B1 504 aa13.77□□□□□ -0.2
DDX54-201ENST00000306014 HAUS8Q9BT25 410 aa13.77□□□□□ -0.2
DDX54-201ENST00000306014 GGA3Q9NZ52 723 aa13.77□□□□□ -0.2
DDX54-201ENST00000306014 DTNAQ9Y4J8 743 aa13.77□□□□□ -0.2
DDX54-201ENST00000306014 C5orf60A6NFR6 353 aa13.77□□□□□ -0.21
DDX54-201ENST00000306014 KRT36O76013 467 aa13.77□□□□□ -0.21
DDX54-201ENST00000306014 KCNA4P22459 653 aa13.77□□□□□ -0.21
DDX54-201ENST00000306014 GLRA2P23416 452 aa13.77□□□□□ -0.21
DDX54-201ENST00000306014 YWHAHQ04917 246 aaPredicted RBP13.77□□□□□ -0.21
DDX54-201ENST00000306014 EFHC1Q5JVL4 640 aa13.77□□□□□ -0.21
DDX54-201ENST00000306014 CATSPER1Q8NEC5 780 aa13.77□□□□□ -0.21
DDX54-201ENST00000306014 TFB1MQ8WVM0 346 aaKnown RBP13.77□□□□□ -0.21
DDX54-201ENST00000306014 SGF29Q96ES7 293 aa13.77□□□□□ -0.21
DDX54-201ENST00000306014 TSPYL2Q9H2G4 693 aaPredicted RBP13.77□□□□□ -0.21
DDX54-201ENST00000306014 LRRC4CQ9HCJ2 640 aa13.77□□□□□ -0.21
DDX54-201ENST00000306014 MRPL40Q9NQ50 206 aaKnown RBP13.77□□□□□ -0.21
DDX54-201ENST00000306014 FBXO6Q9NRD1 293 aaPredicted RBP13.77□□□□□ -0.21
DDX54-201ENST00000306014 PRMT7Q9NVM4 692 aaPredicted RBP13.77□□□□□ -0.21
DDX54-201ENST00000306014 POLIQ9UNA4 740 aa13.77□□□□□ -0.21
DDX54-201ENST00000306014 DFFAO00273 331 aa13.77□□□□□ -0.21
DDX54-201ENST00000306014 RPL22P35268 128 aaKnown RBP13.77□□□□□ -0.21
DDX54-201ENST00000306014 DPYSL3Q14195 570 aa13.77□□□□□ -0.21
DDX54-201ENST00000306014 CCDC60Q8IWA6 550 aaPredicted RBP13.77□□□□□ -0.21
DDX54-201ENST00000306014 CCDC117Q8IWD4 279 aaPredicted RBP13.77□□□□□ -0.21
DDX54-201ENST00000306014 MMP19Q99542 508 aa13.77□□□□□ -0.21
DDX54-201ENST00000306014 TMEM109Q9BVC6 243 aa13.77□□□□□ -0.21
DDX54-201ENST00000306014 VPS33BQ9H267 617 aa13.77□□□□□ -0.21
DDX54-201ENST00000306014 PSMG1O95456 288 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 MOCS2O96007 188 aaPredicted RBP13.76□□□□□ -0.21
DDX54-201ENST00000306014 SETSIPP0DME0 302 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 MPZL3Q6UWV2 235 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 C16orf89Q6UX73 402 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 TNIP3Q96KP6 325 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 MRPL1Q9BYD6 325 aaKnown RBP13.76□□□□□ -0.21
DDX54-201ENST00000306014 SDR42E2A6NKP2 422 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 EEF2KO00418 725 aaKnown RBP13.76□□□□□ -0.21
DDX54-201ENST00000306014 SH3BP5O60239 455 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 VDRP11473 427 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 ALADP13716 330 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 PDK1Q15118 436 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 ZACNQ401N2 412 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 DEFB107AQ8IZN7 70 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 TMEM176AQ96HP8 235 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 PFDN6O15212 129 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 RALBP11234 206 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 KDELR1P24390 212 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 PDK2Q15119 407 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 NFIL3Q16649 462 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 OLFML2BQ68BL8 750 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 LAYNQ6UX15 382 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 FAM13CQ8NE31 585 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 HELQQ8TDG4 1101 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 CNBD2Q96M20 576 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 BAG5Q9UL15 447 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 ABT1Q9ULW3 272 aaKnown RBP13.76□□□□□ -0.21
DDX54-201ENST00000306014 IGLV3-22A0A075B6J6 115 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 C3orf70A6NLC5 250 aaPredicted RBP13.76□□□□□ -0.21
DDX54-201ENST00000306014 H0YGN5 161 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 APOC4-APOC2K7ER74 178 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 APOC2P02655 101 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 PTGER2P43116 358 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 FASTKD3Q14CZ7 662 aaKnown RBP13.76□□□□□ -0.21
DDX54-201ENST00000306014 C4orf22Q6V702 233 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.76□□□□□ -0.21
DDX54-201ENST00000306014 OR5B17Q8NGF7 314 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 MAGEC3Q8TD91 643 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 CEP41Q9BYV8 373 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 SUN2Q9UH99 717 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 SOX13Q9UN79 622 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 DRG1Q9Y295 367 aaKnown RBP13.76□□□□□ -0.21
DDX54-201ENST00000306014 NFS1Q9Y697 457 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 ASTN2O75129 1339 aaPredicted RBP13.76□□□□□ -0.21
DDX54-201ENST00000306014 ADGRA3Q8IWK6 1321 aa13.76□□□□□ -0.21
DDX54-201ENST00000306014 IGKV6D-41A0A0C4DH26 115 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 PDE5AO76074 875 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 ATP4AP20648 1035 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 SKIV2L2P42285 1042 aaKnown RBP13.75□□□□□ -0.21
DDX54-201ENST00000306014 BACE1P56817 501 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 SLC1A5Q15758 541 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 GLRA4Q5JXX5 417 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 N4BP2L1Q5TBK1 243 aaPredicted RBP13.75□□□□□ -0.21
DDX54-201ENST00000306014 IRGCQ6NXR0 463 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 TATDN1Q6P1N9 297 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 FAM131BQ86XD5 332 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 APLFQ8IW19 511 aaPredicted RBP13.75□□□□□ -0.21
DDX54-201ENST00000306014 TRIM15Q9C019 465 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 HACL1Q9UJ83 578 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 EIF4BP23588 611 aaKnown RBP13.75□□□□□ -0.21
DDX54-201ENST00000306014 PDCD2Q16342 344 aaPredicted RBP13.75□□□□□ -0.21
DDX54-201ENST00000306014 TCHHL1Q5QJ38 904 aaPredicted RBP13.75□□□□□ -0.21
DDX54-201ENST00000306014 TEDDM1Q5T9Z0 273 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 CXorf38Q8TB03 319 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 PTPRN2Q92932 1015 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 ZNF184Q99676 751 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms