RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ZNF395Q9H8N7 513 aaPredicted RBP13.54□□□□□ -0.24
TRIM35-201ENST00000305364 HERC5Q9UII4 1024 aaKnown RBP13.54□□□□□ -0.24
TRIM35-201ENST00000305364 E9PBE3 544 aa13.54□□□□□ -0.24
TRIM35-201ENST00000305364 PIK3R2O00459 728 aa13.54□□□□□ -0.24
TRIM35-201ENST00000305364 KLHL41O60662 606 aa13.54□□□□□ -0.24
TRIM35-201ENST00000305364 RNASEH1O60930 286 aaKnown RBP13.54□□□□□ -0.24
TRIM35-201ENST00000305364 CYP3A4P08684 503 aa13.54□□□□□ -0.24
TRIM35-201ENST00000305364 DSG3P32926 999 aa13.54□□□□□ -0.24
TRIM35-201ENST00000305364 GARSP41250 739 aaKnown RBP13.54□□□□□ -0.24
TRIM35-201ENST00000305364 PRAMEP78395 509 aa13.54□□□□□ -0.24
TRIM35-201ENST00000305364 C1QBPQ07021 282 aaKnown RBP13.54□□□□□ -0.24
TRIM35-201ENST00000305364 ACAP1Q15027 740 aa13.54□□□□□ -0.24
TRIM35-201ENST00000305364 FASTKD1Q53R41 847 aaKnown RBP13.54□□□□□ -0.24
TRIM35-201ENST00000305364 SPDYAQ5MJ70 313 aa13.54□□□□□ -0.24
TRIM35-201ENST00000305364 FAM182AQ5T1J6 154 aa13.54□□□□□ -0.24
TRIM35-201ENST00000305364 C16orf46Q6P387 395 aa13.54□□□□□ -0.24
TRIM35-201ENST00000305364 POLNQ7Z5Q5 900 aa13.54□□□□□ -0.24
TRIM35-201ENST00000305364 KBTBD2Q8IY47 623 aa13.54□□□□□ -0.24
TRIM35-201ENST00000305364 ZNF513Q8N8E2 541 aaPredicted RBP13.54□□□□□ -0.24
TRIM35-201ENST00000305364 PTCD3Q96EY7 689 aaKnown RBP13.54□□□□□ -0.24
TRIM35-201ENST00000305364 CYP26B1Q9NR63 512 aa13.54□□□□□ -0.24
TRIM35-201ENST00000305364 WRAP73Q9P2S5 460 aaPredicted RBP13.54□□□□□ -0.24
TRIM35-201ENST00000305364 INPP5FQ9Y2H2 1132 aa13.54□□□□□ -0.24
TRIM35-201ENST00000305364 TBC1D12O60347 775 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 AVILO75366 819 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 OR6B1O95007 311 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 ITGA2BP08514 1039 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 IL1R1P14778 569 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 INHBEP58166 350 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 TAP1Q03518 808 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 STKLD1Q8NE28 680 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 CATSPER1Q8NEC5 780 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 GFM2Q969S9 779 aaKnown RBP13.53□□□□□ -0.24
TRIM35-201ENST00000305364 ADPGKQ9BRR6 497 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 LZTS1Q9Y250 596 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 SMAPO00193 183 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 DCXO43602 365 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 ITGAVP06756 1048 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 MX2P20592 715 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 SERPINB5P36952 375 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 ALDH1A3P47895 512 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 GPX6P59796 221 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 PDPK2PQ6A1A2 396 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 AAGABQ6PD74 315 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 MYLK4Q86YV6 388 aaPredicted RBP13.53□□□□□ -0.24
TRIM35-201ENST00000305364 PLEKHO2Q8TD55 490 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 CPT1BQ92523 772 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 THAP1Q9NVV9 213 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 GAKO14976 1311 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 hCG_1818297A0A087WSY0 165 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 YWHAEP62258 255 aaKnown RBP13.53□□□□□ -0.24
TRIM35-201ENST00000305364 RALGPS1Q5JS13 557 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 MCPH1Q8NEM0 835 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 POLR3FQ9H1D9 316 aaPredicted RBP13.53□□□□□ -0.24
TRIM35-201ENST00000305364 FBXO28Q9NVF7 368 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 ZC3H11AO75152 810 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRIM35-201ENST00000305364 TNFAIP8O95379 198 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 NOMO3P69849 1222 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 TREML1Q86YW5 311 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 DAW1Q8N136 415 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 THAP11Q96EK4 314 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 TMA16Q96EY4 203 aaKnown RBP13.53□□□□□ -0.24
TRIM35-201ENST00000305364 TLE6Q9H808 572 aa13.53□□□□□ -0.24
TRIM35-201ENST00000305364 SSU72Q9NP77 194 aaKnown RBP13.53□□□□□ -0.24
TRIM35-201ENST00000305364 SERPINA6P08185 405 aa13.52□□□□□ -0.24
TRIM35-201ENST00000305364 JAK3P52333 1124 aa13.52□□□□□ -0.24
TRIM35-201ENST00000305364 GTF2BQ00403 316 aa13.52□□□□□ -0.24
TRIM35-201ENST00000305364 DLG1Q12959 904 aa13.52□□□□□ -0.24
TRIM35-201ENST00000305364 TNFAIP1Q13829 316 aa13.52□□□□□ -0.24
TRIM35-201ENST00000305364 PRKD1Q15139 912 aaPredicted RBP13.52□□□□□ -0.24
TRIM35-201ENST00000305364 PRR5LQ6MZQ0 368 aa13.52□□□□□ -0.24
TRIM35-201ENST00000305364 SWSAP1Q6NVH7 229 aa13.52□□□□□ -0.24
TRIM35-201ENST00000305364 TSHZ1Q6ZSZ6 1077 aa13.52□□□□□ -0.24
TRIM35-201ENST00000305364 LZICQ8WZA0 190 aa13.52□□□□□ -0.24
TRIM35-201ENST00000305364 SKA1Q96BD8 255 aa13.52□□□□□ -0.24
TRIM35-201ENST00000305364 VCPIP1Q96JH7 1222 aa13.52□□□□□ -0.24
TRIM35-201ENST00000305364 P2RX7Q99572 595 aaKnown RBP13.52□□□□□ -0.24
TRIM35-201ENST00000305364 GPAMQ9HCL2 828 aa13.52□□□□□ -0.24
TRIM35-201ENST00000305364 GIPC1O14908 333 aa13.52□□□□□ -0.25
TRIM35-201ENST00000305364 DLDP09622 509 aaKnown RBP13.52□□□□□ -0.25
TRIM35-201ENST00000305364 FAM58BPP0C7Q3 252 aa13.52□□□□□ -0.25
TRIM35-201ENST00000305364 TCF4P15884 667 aa13.52□□□□□ -0.25
TRIM35-201ENST00000305364 SESN2P58004 480 aaPredicted RBP13.52□□□□□ -0.25
TRIM35-201ENST00000305364 MRPS22P82650 360 aaKnown RBP13.52□□□□□ -0.25
TRIM35-201ENST00000305364 DPYSL3Q14195 570 aa13.52□□□□□ -0.25
TRIM35-201ENST00000305364 TCEAL1Q15170 157 aa13.52□□□□□ -0.25
TRIM35-201ENST00000305364 FAM102AQ5T9C2 384 aaPredicted RBP13.52□□□□□ -0.25
TRIM35-201ENST00000305364 C16orf87Q6PH81 154 aa13.52□□□□□ -0.25
TRIM35-201ENST00000305364 HPS6Q86YV9 775 aa13.52□□□□□ -0.25
TRIM35-201ENST00000305364 UNC45BQ8IWX7 931 aa13.52□□□□□ -0.25
TRIM35-201ENST00000305364 PIWIL2Q8TC59 973 aaKnown RBP13.52□□□□□ -0.25
TRIM35-201ENST00000305364 DDI1Q8WTU0 396 aa13.52□□□□□ -0.25
TRIM35-201ENST00000305364 LMCD1Q9NZU5 365 aa13.52□□□□□ -0.25
TRIM35-201ENST00000305364 NUP98P52948 1817 aa13.52□□□□□ -0.25
TRIM35-201ENST00000305364 LYPLA1O75608 230 aaPredicted RBP13.52□□□□□ -0.25
TRIM35-201ENST00000305364 TNNC2P02585 160 aa13.52□□□□□ -0.25
TRIM35-201ENST00000305364 MAPTP10636 758 aaKnown RBP13.52□□□□□ -0.25
TRIM35-201ENST00000305364 UNGP13051 313 aaPredicted RBP13.52□□□□□ -0.25
TRIM35-201ENST00000305364 STIP1P31948 543 aaKnown RBP13.52□□□□□ -0.25
TRIM35-201ENST00000305364 RMDN3Q96TC7 470 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms