RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 SMTNL2Q2TAL5 461 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 NDUFAF6Q330K2 333 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 GATAD2AQ86YP4 633 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 FAM71DQ8N9W8 422 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 C3orf20Q8ND61 904 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 TFB1MQ8WVM0 346 aaKnown RBP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 SERPINB12Q96P63 405 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 QKIQ96PU8 341 aaKnown RBP eCLIP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 OSGEPL1Q9H4B0 414 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 RUVBL2Q9Y230 463 aaKnown RBP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 NR5A2O00482 541 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 PABPC1P11940 636 aaKnown RBP10.72□□□□□ -0.69
CLIP1-201ENST00000302528 EPHB2P29323 1055 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 USP11P51784 963 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 SLC18A3Q16572 532 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 MIEF2Q96C03 454 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 MOV10L1Q9BXT6 1211 aaKnown RBP10.72□□□□□ -0.69
CLIP1-201ENST00000302528 OSBPL5Q9H0X9 879 aaPredicted RBP10.72□□□□□ -0.69
CLIP1-201ENST00000302528 SRP68Q9UHB9 627 aaKnown RBP10.72□□□□□ -0.69
CLIP1-201ENST00000302528 ANAPC2Q9UJX6 822 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 CDC42BPBQ9Y5S2 1711 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 DGAT1O75907 488 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 HALP42357 657 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 JAMLQ86YT9 394 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 NOL6Q9H6R4 1146 aaKnown RBP10.72□□□□□ -0.69
CLIP1-201ENST00000302528 BARHL2Q9NY43 387 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 NEDD4P46934 1319 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 ADGRA3Q8IWK6 1321 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 ERVV-1B6SEH8 477 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 NMT2O60551 498 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 GLRA3O75311 464 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 ATG7O95352 703 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 BMP10O95393 424 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 GRK4P32298 578 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 ALDH9A1P49189 494 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 TMEM62Q0P6H9 643 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 KLHL12Q53G59 568 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 XKR3Q5GH77 459 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 KIAA0408Q6ZU52 694 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 ZCCHC7Q8N3Z6 543 aaKnown RBP10.72□□□□□ -0.69
CLIP1-201ENST00000302528 UBA3Q8TBC4 463 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 SCUBE2Q9NQ36 999 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 UBA2Q9UBT2 640 aaPredicted RBP10.72□□□□□ -0.69
CLIP1-201ENST00000302528 PPIEQ9UNP9 301 aaKnown RBP10.72□□□□□ -0.69
CLIP1-201ENST00000302528 CHURC1-FNTBB4DL54 471 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 ZCCHC18P0CG32 403 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 FOSL2P15408 326 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 PSMD4P55036 377 aaKnown RBP10.72□□□□□ -0.69
CLIP1-201ENST00000302528 C2CD6Q53TS8 623 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 FAM182BQ5T319 152 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 ITIH6Q6UXX5 1313 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 RPRD1AQ96P16 312 aaPredicted RBP10.72□□□□□ -0.69
CLIP1-201ENST00000302528 EMILIN2Q9BXX0 1053 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 GPRC5DQ9NZD1 345 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 STK39Q9UEW8 545 aa10.72□□□□□ -0.69
CLIP1-201ENST00000302528 ATP7BP35670 1465 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 MLH3Q9UHC1 1453 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 NPHP3-ACAD11A0A0J9YXS1 232 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 C2CD2LO14523 706 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 IL18RAPO95256 599 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 UMPSP11172 480 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 OVGP1Q12889 678 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 GRIK3Q13003 919 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 ATP1A4Q13733 1029 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 TAB1Q15750 504 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 TIGD7Q6NT04 549 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-201ENST00000302528 TMEM26Q6ZUK4 368 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 FAM111AQ96PZ2 611 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 CLPBQ9H078 707 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 RNF181Q9P0P0 153 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 RPN2P04844 631 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 VAV1P15498 845 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 LBPP18428 481 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 STIP1P31948 543 aaKnown RBP10.71□□□□□ -0.69
CLIP1-201ENST00000302528 FDFT1P37268 417 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 ELOVL6Q9H5J4 265 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 CHST12Q9NRB3 414 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 METTL5Q9NRN9 209 aaKnown RBP10.71□□□□□ -0.69
CLIP1-201ENST00000302528 ING3Q9NXR8 418 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 CHKBQ9Y259 395 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 PCDHB7Q9Y5E2 793 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 RAD54BQ9Y620 910 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 FCGR1AP12314 374 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 MYL12AP19105 171 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 CENPCQ03188 943 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 DNAJC3Q13217 504 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 TSNQ15631 228 aaKnown RBP10.71□□□□□ -0.69
CLIP1-201ENST00000302528 MAPK11Q15759 364 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 FAM228AQ86W67 206 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 ZNF671Q8TAW3 534 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 SPPL2AQ8TCT8 520 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 SLC40A1Q9NP59 571 aa10.71□□□□□ -0.69
CLIP1-201ENST00000302528 CCDC189A1A4V9 331 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 USP27XA6NNY8 438 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 TNFRSF21O75509 655 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 FAM200BP0CF97 657 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 MYBP10242 640 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 SLC2A3P11169 496 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 ITGALP20701 1170 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 LSP1P33241 339 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms