RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 ERMARDQ5T6L9 678 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 METTL3Q86U44 580 aaKnown RBP8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 TAB3Q8N5C8 712 aaPredicted RBP8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 LRRC8CQ8TDW0 803 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 ZNF296Q8WUU4 475 aaPredicted RBP8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 CRYGNQ8WXF5 182 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 UBXN6Q9BZV1 441 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 SMYD3Q9H7B4 428 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 NFU1Q9UMS0 254 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 AKAP11Q9UKA4 1901 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 NCANO14594 1321 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 HACD1B0YJ81 288 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 TISP43B9A030 160 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 DDX3XO00571 662 aaKnown RBP eCLIP8.64□□□□□ -1.031e-6■■■■□ 26.1
SNRPD1-201ENST00000300413 TLL1O43897 1013 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 PMS2P54278 862 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 DLG4P78352 724 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 ADIGQ0VDE8 80 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 MAPK7Q13164 816 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 POLD3Q15054 466 aaPredicted RBP8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 TARBP2Q15633 366 aaKnown RBP8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 DENND5BQ6ZUT9 1274 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 NOP9Q86U38 636 aaKnown RBP8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 ANKLE1Q8NAG6 615 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 HASPINQ8TF76 798 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 IRGQQ8WZA9 623 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 CFAP36Q96G28 342 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 PLEKHA4Q9H4M7 779 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 FAM50BQ9Y247 325 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 ZNF510Q9Y2H8 683 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 RGPD3A6NKT7 1758 aaPredicted RBP8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 RGPD4Q7Z3J3 1758 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 IGKV6D-21A0A0A0MT36 114 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 RASSF10A6NK89 507 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 USP27XA6NNY8 438 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 FGF10O15520 208 aaPredicted RBP8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 PLEKP08567 350 aaPredicted RBP8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 PPP3CCP48454 512 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 CCT5P48643 541 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 SERPINB9P50453 376 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 SP2Q02086 613 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 ANKRD20A3Q5VUR7 823 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 ZC3H18Q86VM9 953 aaKnown RBP8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 OR5B17Q8NGF7 314 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 GDAP1Q8TB36 358 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 FBF1Q8TES7 1133 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 C1orf54Q8WWF1 131 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 VAT1Q99536 393 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 SLC25A13Q9UJS0 675 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 PACSIN2Q9UNF0 486 aaPredicted RBP8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 TAF1LQ8IZX4 1826 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 PI4K2BG5E9Z4 385 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 H0Y626 953 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 PIK3R2O00459 728 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 PEX10O60683 326 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 CYP1A2P05177 515 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 HMBSP08397 361 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 VEGFBP49765 207 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 RASSF2P50749 326 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 CCNG2Q16589 344 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 MEI1Q5TIA1 1274 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 IFNLR1Q8IU57 520 aaPredicted RBP8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 FBXO22Q8NEZ5 403 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 STK32AQ8WU08 396 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 FBXL18Q96ME1 805 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 BCAP29Q9UHQ4 241 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 PNMA6AP0CW24 399 aaPredicted RBP8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 CDC25CP30307 473 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 HTR7P34969 479 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 KCNMA1Q12791 1236 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 EFEMP1Q12805 493 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 PHLDB3Q6NSJ2 640 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 CES5AQ6NT32 575 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 RETSATQ6NUM9 610 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 CAPN12Q6ZSI9 719 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 WNT8BQ93098 351 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 ACBD6Q9BR61 282 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 ANGPTL3Q9Y5C1 460 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 ATMINO43313 823 aaPredicted RBP8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 CYBAP13498 195 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 COILP38432 576 aaPredicted RBP8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 IRX5P78411 483 aaPredicted RBP8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 LLGL1Q15334 1064 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 LCLAT1Q6UWP7 414 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 SPOCD1Q6ZMY3 1216 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 PPIL6Q8IXY8 311 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 NUP93Q8N1F7 819 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 ANKRD42Q8N9B4 389 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 TTC8Q8TAM2 541 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 PPM1EQ8WY54 764 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 BAP1Q92560 729 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 RMDN1Q96DB5 314 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 CYTH2Q99418 400 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 CINPQ9BW66 212 aaPredicted RBP8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 DUSP16Q9BY84 665 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 INTS9Q9NV88 658 aaKnown RBP8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 PCDHGC3Q9UN70 934 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 RAD54BQ9Y620 910 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 TADA3O75528 432 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 ZNF865P0CJ78 1059 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms