RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 KRT78Q8N1N4 520 aa7.17□□□□□ -1.26
GAPVD1-202ENST00000297933 ZNF557Q8N988 423 aaPredicted RBP7.17□□□□□ -1.26
GAPVD1-202ENST00000297933 TRAPPC12Q8WVT3 735 aa7.17□□□□□ -1.26
GAPVD1-202ENST00000297933 PPP1R16AQ96I34 528 aa7.17□□□□□ -1.26
GAPVD1-202ENST00000297933 WNK4Q96J92 1243 aa7.17□□□□□ -1.26
GAPVD1-202ENST00000297933 WDR41Q9HAD4 459 aa7.17□□□□□ -1.26
GAPVD1-202ENST00000297933 MRPS23Q9Y3D9 190 aaKnown RBP7.17□□□□□ -1.26
GAPVD1-202ENST00000297933 CDY2AQ9Y6F7 541 aa7.17□□□□□ -1.26
GAPVD1-202ENST00000297933 PREX1Q8TCU6 1659 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 PJA2O43164 708 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 SP100P23497 879 aaPredicted RBP7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 ACAT1P24752 427 aaKnown RBP7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 SOX10P56693 466 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 MYL6P60660 151 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 CYP24A1Q07973 514 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 STX3Q13277 289 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 FAM83EQ2M2I3 478 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 PRR23CQ6ZRP0 262 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 ZNF614Q8N883 585 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 ELOVL4Q9GZR5 314 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 MIR1-1HGQ9H1L0 117 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 KRCC1Q9NPI7 259 aaPredicted RBP7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 ASAH2Q9NR71 780 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 PSMC3IPQ9P2W1 217 aaPredicted RBP7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 INO80Q9ULG1 1556 aaPredicted RBP7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 LRRIQ1Q96JM4 1722 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 NRCAMQ92823 1304 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 EVPLLA8MZ36 301 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 RBAK-RBAKDNI3L0D1 243 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 IRF6O14896 467 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 SGPL1O95470 568 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 TAL1P17542 331 aaPredicted RBP7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 TGM2P21980 687 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 CHI3L1P36222 383 aaPredicted RBP7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 HALP42357 657 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 HDAC4P56524 1084 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 PRUNE1Q86TP1 453 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 LPCAT1Q8NF37 534 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 STAMBPL1Q96FJ0 436 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 FICDQ9BVA6 458 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 ZCCHC2Q9C0B9 1178 aaKnown RBP7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 SLC28A3Q9HAS3 691 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 ATP13A1Q9HD20 1204 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 DMAP1Q9NPF5 467 aaPredicted RBP7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 EIF3LQ9Y262 564 aaKnown RBP7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 F8W810 466 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 FAM107AO95990 144 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 GNRH1P01148 92 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 THOP1P52888 689 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 KCNK10P57789 538 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 C3orf67Q6ZVT6 689 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 PPIL6Q8IXY8 311 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 EDEM1Q92611 657 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 TMA16Q96EY4 203 aaKnown RBP7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 CORO1BQ9BR76 489 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 IDI2Q9BXS1 227 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 ZNF518BQ9C0D4 1074 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 PNMA8BQ9ULN7 279 aaPredicted RBP7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 AP4E1Q9UPM8 1137 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 GOLGA8TH3BQL2 631 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 OR1E1P30953 314 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 CASP4P49662 377 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 TROAPQ12815 778 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 DOK6Q6PKX4 331 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 C16orf59Q7L2K0 433 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 LGI2Q8N0V4 545 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 TMC2Q8TDI7 906 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 SPACA7Q96KW9 195 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 SERPINB11Q96P15 392 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 PNMA5Q96PV4 448 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 MRPL1Q9BYD6 325 aaKnown RBP7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 KCTD10Q9H3F6 313 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 SCOCQ9UIL1 159 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 TDRKHQ9Y2W6 561 aaKnown RBP7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 ZMYM2Q9UBW7 1377 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 USP32Q8NFA0 1604 aa7.16□□□□□ -1.26
GAPVD1-202ENST00000297933 NCF1BA6NI72 391 aaPredicted RBP7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 NCF1CA8MVU1 366 aaPredicted RBP7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 PSTPIP1O43586 416 aa7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 ADH1AP07327 375 aa7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 SMIM10L2AP0DMW4 78 aa7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 SMIM10L2BP0DMW5 78 aa7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 NCF1P14598 390 aaPredicted RBP7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 PSMA3P25788 255 aa7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 HSPA9P38646 679 aaKnown RBP7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 GIT2Q14161 759 aa7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 TJAP1Q5JTD0 557 aa7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 AGAP9Q5VTM2 703 aa7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 TPGS1Q6ZTW0 290 aa7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 C3orf62Q6ZUJ4 267 aa7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 HORMAD1Q86X24 394 aa7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 TNIP2Q8NFZ5 429 aa7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 FAM161BQ96MY7 647 aa7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 POP1Q99575 1024 aaKnown RBP7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 CBWD1Q9BRT8 395 aa7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 ADAM33Q9BZ11 813 aa7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 TBC1D13Q9NVG8 400 aa7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 BARX2Q9UMQ3 279 aaPredicted RBP7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 COL5A2P05997 1499 aaPredicted RBP7.15□□□□□ -1.26
GAPVD1-202ENST00000297933 KPNA3O00505 521 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms