RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 STIP1P31948 543 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 SLC26A3P40879 764 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 EIF2S3P41091 472 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 AGAP9Q5VTM2 703 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ANO7Q6IWH7 933 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 SPIRE2Q8WWL2 714 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ELMO1Q92556 727 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 SIRT1Q96EB6 747 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PGM2Q96G03 612 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PRAM1Q96QH2 718 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PAGR1Q9BTK6 254 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 SUGT1Q9Y2Z0 365 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 TELO2Q9Y4R8 837 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 FAM220BPB1ANY3 271 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PET100P0DJ07 73 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ADSSP30520 456 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 CAPZA2P47755 286 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 VMACQ2NL98 169 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PLCZ1Q86YW0 608 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 CD302Q8IX05 232 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PPP1R16BQ96T49 567 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 GPCPD1Q9NPB8 672 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PRDM4Q9UKN5 801 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 TRMUO75648 421 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PSMA1P25786 263 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 RPL4P36578 427 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 SLCO1A2P46721 670 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 FRG1Q14331 258 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ZNF174Q15697 407 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 FAM212AQ96EL1 285 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 GAL3ST1Q99999 423 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 DDX20Q9UHI6 824 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 STAP1Q9ULZ2 295 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 STX16-NPEPL1H3BU86 382 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 FKBP9O95302 570 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 LRRC74AQ0VAA2 488 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 NCAPHQ15003 741 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 OCLNQ16625 522 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 RFX8Q6ZV50 586 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 NOP9Q86U38 636 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 MAB21L3Q8N8X9 362 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 OR6Y1Q8NGX8 325 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 TLR7Q9NYK1 1049 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PTBP2Q9UKA9 531 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ERBB4Q15303 1308 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 TMEM114B3SHH9 223 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 SLC22A2O15244 555 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 HMBSP08397 361 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ZNF23P17027 643 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 GARTP22102 1010 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 SLC1A4P43007 532 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 BLMHQ13867 455 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 RASA2Q15283 850 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PPP1R18Q6NYC8 613 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 DUS1LQ6P1R4 473 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 TTC23LQ6PF05 361 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ARCQ7LC44 396 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 JARID2Q92833 1246 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 BTF3L4Q96K17 158 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 HPS4Q9NQG7 708 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 CHRAC1Q9NRG0 131 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PAK5Q9P286 719 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 CFL2Q9Y281 166 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PTPRQQ9UMZ3 2332 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 A0A1B0GTH6 734 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 NCAM2O15394 837 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 GPAA1O43292 621 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 CCNKO75909 580 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 CYP2J2P51589 502 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PDIA2Q13087 525 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 BRMS1LQ5PSV4 323 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 TWF2Q6IBS0 349 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 DCLK2Q8N568 766 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 MAGEE2Q8TD90 523 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 JPH4Q96JJ6 628 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 GMIPQ9P107 970 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 AIREO43918 545 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 TOP3BO95985 862 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 LDLRP01130 860 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 CYP2D6P10635 497 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 RBM34P42696 430 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 CDK16Q00536 496 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ROR1Q01973 937 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 MTX3Q5HYI7 312 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PIK3AP1Q6ZUJ8 805 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 RFX6Q8HWS3 928 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ACCSQ96QU6 501 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 CALN1Q9BXU9 219 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 MALT1Q9UDY8 824 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 RPS6KA6Q9UK32 745 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ABCC4O15439 1325 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 C2orf71A6NGG8 1288 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 E5RI56 91 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ZBTB7BO15156 539 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 SLC16A3O15427 465 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 SERPINA1P01009 418 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 IFNAR1P17181 557 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 MUTP22033 750 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 GSCP56915 257 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms