RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 TAF5Q15542 800 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 ILDR1Q86SU0 546 aaPredicted RBP15.97■□□□□ 0.15
FNDC1-201ENST00000297267 CCDC103Q8IW40 242 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 MYCBPAPQ8TBZ2 947 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 ACOX2Q99424 681 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 MTO1Q9Y2Z2 717 aaKnown RBP15.97■□□□□ 0.15
FNDC1-201ENST00000297267 COPAP53621 1224 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 ST8SIA6P61647 398 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 MAPK7Q13164 816 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 CLEC17AQ6ZS10 378 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 RD3Q7Z3Z2 195 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 FBXO25Q8TCJ0 367 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 SSU72P8A0A1W2PR75 194 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 C17orf102A2RUQ5 167 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 SHROOM1Q2M3G4 852 aaPredicted RBP15.96■□□□□ 0.15
FNDC1-201ENST00000297267 PATL1Q86TB9 770 aaKnown RBP15.96■□□□□ 0.15
FNDC1-201ENST00000297267 KATNAL1Q9BW62 490 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 DDX18Q9NVP1 670 aaKnown RBP15.96■□□□□ 0.15
FNDC1-201ENST00000297267 MICAL2O94851 1124 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 CLK2P49760 499 aaKnown RBP15.96■□□□□ 0.15
FNDC1-201ENST00000297267 COL9A3Q14050 684 aaPredicted RBP15.96■□□□□ 0.15
FNDC1-201ENST00000297267 MAPK11Q15759 364 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 TEDDM1Q5T9Z0 273 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 CENPLQ8N0S6 344 aaPredicted RBP15.96■□□□□ 0.15
FNDC1-201ENST00000297267 COLGALT1Q8NBJ5 622 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 IQSEC2Q5JU85 1478 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 CBX4O00257 560 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 ALDH9A1P49189 494 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 ACAP1Q15027 740 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 MAPRE1Q15691 268 aaKnown RBP15.96■□□□□ 0.15
FNDC1-201ENST00000297267 DDI2Q5TDH0 399 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 SCARA3Q6AZY7 606 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 TRAF7Q6Q0C0 670 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 DNAJB3Q8WWF6 145 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 DDX20Q9UHI6 824 aaKnown RBP15.96■□□□□ 0.15
FNDC1-201ENST00000297267 TSC22D4Q9Y3Q8 395 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 MGAT1P26572 445 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 MAPK9P45984 424 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 MAPRE2Q15555 327 aa15.96■□□□□ 0.15
FNDC1-201ENST00000297267 PDGFDQ9GZP0 370 aaPredicted RBP15.96■□□□□ 0.15
FNDC1-201ENST00000297267 ASS1P00966 412 aaKnown RBP15.96■□□□□ 0.14
FNDC1-201ENST00000297267 MBL2P11226 248 aaPredicted RBP15.96■□□□□ 0.14
FNDC1-201ENST00000297267 ALDH1A3P47895 512 aa15.96■□□□□ 0.14
FNDC1-201ENST00000297267 PRAMEF19Q5SWL8 479 aa15.96■□□□□ 0.14
FNDC1-201ENST00000297267 DNAJC14Q6Y2X3 702 aaPredicted RBP15.96■□□□□ 0.14
FNDC1-201ENST00000297267 SYDE1Q6ZW31 735 aaPredicted RBP15.96■□□□□ 0.14
FNDC1-201ENST00000297267 PLA2G12BQ9BX93 195 aa15.96■□□□□ 0.14
FNDC1-201ENST00000297267 BAZ2BQ9UIF8 2168 aaKnown RBP15.96■□□□□ 0.14
FNDC1-201ENST00000297267 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.95■□□□□ 0.14
FNDC1-201ENST00000297267 TRAF2Q12933 501 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 RASA2Q15283 850 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 RXFP2Q8WXD0 754 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 FIG4Q92562 907 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 GFM2Q969S9 779 aaKnown RBP15.95■□□□□ 0.14
FNDC1-201ENST00000297267 CATSPERBQ9H7T0 1116 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 PXMP2Q9NR77 195 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 SMPD4Q9NXE4 827 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 TDRKHQ9Y2W6 561 aaKnown RBP15.95■□□□□ 0.14
FNDC1-201ENST00000297267 AP3B1O00203 1094 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 O00370 1275 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 ATP9AO75110 1047 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 USP1O94782 785 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 CBX6O95503 412 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 ALDH1A1P00352 501 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 TFDP3Q5H9I0 405 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 GRID1Q9ULK0 1009 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 RFX7Q2KHR2 1363 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 EIF3DO15371 548 aaKnown RBP eCLIP15.95■□□□□ 0.14
FNDC1-201ENST00000297267 GJB1P08034 283 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 CYP51A1Q16850 503 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 IER5Q5VY09 327 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 ANKS3Q6ZW76 656 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 PLEKHM3Q6ZWE6 761 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 AGGF1Q8N302 714 aaeCLIP15.95■□□□□ 0.14
FNDC1-201ENST00000297267 TSEN2Q8NCE0 465 aaKnown RBP15.95■□□□□ 0.14
FNDC1-201ENST00000297267 RSAD1Q9HA92 442 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 MRPL40Q9NQ50 206 aaKnown RBP15.95■□□□□ 0.14
FNDC1-201ENST00000297267 INTS13Q9NVM9 706 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 F8VZ95 297 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 FAM107AO95990 144 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 FGFR1P11362 822 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 RPS7P62081 194 aaKnown RBP15.95■□□□□ 0.14
FNDC1-201ENST00000297267 PDK1Q15118 436 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 MMGT1Q8N4V1 131 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 OR9Q1Q8NGQ5 310 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 AGO4Q9HCK5 861 aaKnown RBP15.95■□□□□ 0.14
FNDC1-201ENST00000297267 ERAP1Q9NZ08 941 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 SPATA31A1Q5TZJ5 1347 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 TTLL13PA6NNM8 815 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 AMPD1P23109 780 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 CYP2F1P24903 491 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 CLK1P49759 484 aaKnown RBP15.95■□□□□ 0.14
FNDC1-201ENST00000297267 GRIK5Q16478 980 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 CEP78Q5JTW2 689 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 RIPOR1Q6ZS17 1223 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 UXS1Q8NBZ7 420 aa15.95■□□□□ 0.14
FNDC1-201ENST00000297267 SRPK1Q96SB4 655 aaKnown RBP15.95■□□□□ 0.14
FNDC1-201ENST00000297267 CYP7B1O75881 506 aa15.94■□□□□ 0.14
FNDC1-201ENST00000297267 ATP1A4Q13733 1029 aa15.94■□□□□ 0.14
FNDC1-201ENST00000297267 NOTUMQ6P988 496 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms