RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 PRAMEF12O95522 483 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 KRT5P13647 590 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 CDK11BP21127 795 aaKnown RBP12.76□□□□□ -0.37
HMGB2-201ENST00000296503 ACO1P21399 889 aaKnown RBP12.76□□□□□ -0.37
HMGB2-201ENST00000296503 MFAP3P55082 362 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 ARHGAP44Q17R89 818 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 TRIM65Q6PJ69 517 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 SARM1Q6SZW1 724 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 ZNF771Q7L3S4 317 aaPredicted RBP12.76□□□□□ -0.37
HMGB2-201ENST00000296503 ANKRD52Q8NB46 1076 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 PDZD8Q8NEN9 1154 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 BPIFB1Q8TDL5 484 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 USP13Q92995 863 aaPredicted RBP12.76□□□□□ -0.37
HMGB2-201ENST00000296503 FAM81BQ96LP2 452 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 KREMEN1Q96MU8 473 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 SLC22A12Q96S37 553 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 NAT10Q9H0A0 1025 aaKnown RBP12.76□□□□□ -0.37
HMGB2-201ENST00000296503 ARHGEF3Q9NR81 526 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 OBP2AQ9NY56 170 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 GREB1Q4ZG55 1949 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 ZNF638Q14966 1978 aaKnown RBP12.75□□□□□ -0.37
HMGB2-201ENST00000296503 GTPBP10A4D1E9 387 aaKnown RBP12.75□□□□□ -0.37
HMGB2-201ENST00000296503 KRBA1A5PL33 1030 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 RNF225M0QZC1 329 aaPredicted RBP12.75□□□□□ -0.37
HMGB2-201ENST00000296503 PAEPP09466 180 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 PON1P27169 355 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 PDE6CP51160 858 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 MYL5Q02045 173 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 GOLGA7BQ2TAP0 167 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 ANO6Q4KMQ2 910 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 MIIPQ5JXC2 388 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 GJB7Q6PEY0 223 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 ENOSF1Q7L5Y1 443 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 RBBP8NLQ8NC74 664 aaPredicted RBP12.75□□□□□ -0.37
HMGB2-201ENST00000296503 ANKRD20A12PQ8NF67 263 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 CSGALNACT1Q8TDX6 532 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 OVCA2Q8WZ82 227 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 SHDQ96IW2 340 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 LRRC3BQ96PB8 259 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 VPS16Q9H269 839 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 TAB2Q9NYJ8 693 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 IL37Q9NZH6 218 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 CALCOCO1Q9P1Z2 691 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 TSPAN16Q9UKR8 245 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 CCL26Q9Y258 94 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 DENND4CQ5VZ89 1909 aa12.75□□□□□ -0.37
HMGB2-201ENST00000296503 CHADO15335 359 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 TNNT1P13805 278 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 USP8P40818 1118 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 APBA1Q02410 837 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 ARHGAP29Q52LW3 1261 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 IER5LQ5T953 404 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 CC2D1AQ6P1N0 951 aaPredicted RBP12.74□□□□□ -0.37
HMGB2-201ENST00000296503 UBA3Q8TBC4 463 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 KIF9Q9HAQ2 790 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 PNPLA8Q9NP80 782 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 HEBP1Q9NRV9 189 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 GMIPQ9P107 970 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 APEX2Q9UBZ4 518 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 NCANO14594 1321 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 HHLA1C9JL84 531 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 CALCAP01258 141 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 PFKLP17858 780 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 ZNF75DP51815 510 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 FCHO2Q0JRZ9 810 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 MLF2Q15773 248 aaPredicted RBP12.74□□□□□ -0.37
HMGB2-201ENST00000296503 HECTD3Q5T447 861 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 CDKAL1Q5VV42 579 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 GPRIN1Q7Z2K8 1008 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 DNASE1L2Q92874 299 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 ZFYVE19Q96K21 471 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 UBXN6Q9BZV1 441 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 RNF38Q9H0F5 515 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 TLR8Q9NR97 1041 aaKnown RBP12.74□□□□□ -0.37
HMGB2-201ENST00000296503 GKN1Q9NS71 199 aa12.74□□□□□ -0.37
HMGB2-201ENST00000296503 FAM92AA1XBS5 289 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 MBL2P11226 248 aaPredicted RBP12.73□□□□□ -0.37
HMGB2-201ENST00000296503 BRD2P25440 801 aaKnown RBP12.73□□□□□ -0.37
HMGB2-201ENST00000296503 AVPR2P30518 371 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 KIF11P52732 1056 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 BCAT1P54687 386 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 PRKCQQ04759 706 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 PDE4CQ08493 712 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 ZNF268Q14587 947 aaPredicted RBP12.73□□□□□ -0.37
HMGB2-201ENST00000296503 KRT31Q15323 416 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 STILQ15468 1287 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 CNGA2Q16280 664 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 PIGZQ86VD9 579 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 TTC30AQ86WT1 665 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 AOPEPQ8N6M6 819 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 TTC8Q8TAM2 541 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 SH3RF2Q8TEC5 729 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 TFAP2BQ92481 460 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 NACA2Q9H009 215 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 TBC1D17Q9HA65 648 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 DNAJC12Q9UKB3 198 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 SCML2Q9UQR0 700 aa12.73□□□□□ -0.37
HMGB2-201ENST00000296503 ANAPC1Q9H1A4 1944 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 O00370 1275 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 COL9A1P20849 921 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms