RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 MAP3K6O95382 1288 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 TMEM191BP0C7N4 346 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 IMPDH2P12268 514 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 GTF2H1P32780 548 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 ZNF252P-AS1Q0IIN9 211 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 CUL2Q13617 745 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 FAM98CQ17RN3 349 aaKnown RBP10.68□□□□□ -0.7
LMX1A-201ENST00000294816 CES4AQ5XG92 561 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 C16orf46Q6P387 395 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 SLC39A4Q6P5W5 647 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 FBXL19Q6PCT2 694 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 TRIM72Q6ZMU5 477 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 POLNQ7Z5Q5 900 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 SLC26A11Q86WA9 606 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 NCAPG2Q86XI2 1143 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 IFNLR1Q8IU57 520 aaPredicted RBP10.68□□□□□ -0.7
LMX1A-201ENST00000294816 WDR75Q8IWA0 830 aaKnown RBP10.68□□□□□ -0.7
LMX1A-201ENST00000294816 IL31RAQ8NI17 732 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 SLC35B2Q8TB61 432 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 ACER1Q8TDN7 264 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 PLEKHG4BQ96PX9 1271 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 C20orf27Q9GZN8 174 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 MRPL11Q9Y3B7 192 aaKnown RBP10.68□□□□□ -0.7
LMX1A-201ENST00000294816 SPDYE16A6NNV3 312 aaPredicted RBP10.67□□□□□ -0.7
LMX1A-201ENST00000294816 CXorf49A8MYA2 514 aaPredicted RBP10.67□□□□□ -0.7
LMX1A-201ENST00000294816 H7C0C1 242 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 PDLIM1O00151 329 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 MCF2LO15068 1137 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 CD48P09326 243 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 VIL1P09327 827 aaKnown RBP10.67□□□□□ -0.7
LMX1A-201ENST00000294816 ATP5OP48047 213 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 LIG4P49917 911 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 NCKAP1LP55160 1127 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 ADARP55265 1226 aaKnown RBP10.67□□□□□ -0.7
LMX1A-201ENST00000294816 HPCAP84074 193 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 SLC18A2Q05940 514 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 CCNIQ14094 377 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 CNGA3Q16281 694 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 NADK2Q4G0N4 442 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 MAP3K21Q5TCX8 1036 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 LGSNQ5TDP6 509 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 AAGABQ6PD74 315 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 C1orf228Q6PIY5 440 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 ANO5Q75V66 913 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 LRRN4Q8WUT4 740 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 MFSD14AQ96MC6 490 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 RIT2Q99578 217 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 XAB2Q9HCS7 855 aaKnown RBP10.67□□□□□ -0.7
LMX1A-201ENST00000294816 FBXO28Q9NVF7 368 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 DNAJB4Q9UDY4 337 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 LZTS1Q9Y250 596 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 PLLPQ9Y342 182 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 STAM2O75886 525 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 SERPINA6P08185 405 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 RPL10AP62906 217 aaKnown RBP10.67□□□□□ -0.7
LMX1A-201ENST00000294816 C1QBPQ07021 282 aaKnown RBP10.67□□□□□ -0.7
LMX1A-201ENST00000294816 CCDC142Q17RM4 750 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 SEZ6Q53EL9 994 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 TDRD10Q5VZ19 366 aaKnown RBP10.67□□□□□ -0.7
LMX1A-201ENST00000294816 KLHDC10Q6PID8 442 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 NPNTQ6UXI9 565 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 PHF13Q86YI8 300 aaPredicted RBP10.67□□□□□ -0.7
LMX1A-201ENST00000294816 CPXCR1Q8N123 301 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 GALNT4Q8N4A0 578 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 KCTD6Q8NC69 237 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 BSNDQ8WZ55 320 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 C7orf26Q96N11 449 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 PRPF18Q99633 342 aaKnown RBP10.67□□□□□ -0.7
LMX1A-201ENST00000294816 DBNDD1Q9H9R9 158 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 RAB6BQ9NRW1 208 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 DDX56Q9NY93 547 aaKnown RBP10.67□□□□□ -0.7
LMX1A-201ENST00000294816 PTTG2Q9NZH5 202 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 CNTN3Q9P232 1028 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 HSFX1Q9UBD0 423 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 FETUBQ9UGM5 382 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 ZC3H7BQ9UGR2 993 aaKnown RBP10.67□□□□□ -0.7
LMX1A-201ENST00000294816 ZNF711Q9Y462 761 aa10.67□□□□□ -0.7
LMX1A-201ENST00000294816 E2F8A0AVK6 867 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 MAGEB3O15480 346 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 SPP2Q13103 211 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 CYLC2Q14093 348 aaPredicted RBP10.66□□□□□ -0.7
LMX1A-201ENST00000294816 PAOXQ6QHF9 649 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 MAP4K3Q8IVH8 894 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 GMCL1P1Q8NEA9 526 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 SPATA18Q8TC71 538 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 ZNF606Q8WXB4 792 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 CEP170P1Q96L14 293 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 TRIM56Q9BRZ2 755 aaKnown RBP10.66□□□□□ -0.7
LMX1A-201ENST00000294816 APOBEC3GQ9HC16 384 aaKnown RBP10.66□□□□□ -0.7
LMX1A-201ENST00000294816 NDUFA13Q9P0J0 144 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 POLIQ9UNA4 740 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 ZNFX1Q9P2E3 1918 aaKnown RBP10.66□□□□□ -0.7
LMX1A-201ENST00000294816 A0A0B4J269 797 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 EIF2AK2P19525 551 aaKnown RBP10.66□□□□□ -0.7
LMX1A-201ENST00000294816 RPL5P46777 297 aaKnown RBP10.66□□□□□ -0.7
LMX1A-201ENST00000294816 WNT7BP56706 349 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 HNRNPDQ14103 355 aaKnown RBP10.66□□□□□ -0.7
LMX1A-201ENST00000294816 DPYSL3Q14195 570 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 ACAP1Q15027 740 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 TMEM259Q4ZIN3 620 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms