RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 TMEM165Q9HC07 324 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 B3GAT3O94766 335 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 GARTP22102 1010 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 SLC34A1Q06495 639 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 SMAD1Q15797 465 aaKnown RBP11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 MGAT5BQ3V5L5 792 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 GANCQ8TET4 914 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 GIPC2Q8TF65 315 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 ZNF296Q8WUU4 475 aaPredicted RBP11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 DACH2Q96NX9 599 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 RNPEPL1Q9HAU8 725 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 MORF4L1Q9UBU8 362 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 CDY2AQ9Y6F7 541 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 KLHL2O95198 593 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 IL10P22301 178 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 EPHB2P29323 1055 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 CCL23P55773 120 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 KCNJ2P63252 427 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 DMPKQ09013 629 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 PLD1Q13393 1074 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 ZNF280DQ6N043 979 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 SCUBE1Q8IWY4 988 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 RMDN2Q96LZ7 410 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 RUSC1Q9BVN2 902 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 DPP3Q9NY33 737 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 GGA2Q9UJY4 613 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 H0Y626 953 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 TRIM16O95361 564 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 ASGR1P07306 291 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 GJB1P08034 283 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 MYBP10242 640 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 RARGP13631 454 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 GRB10Q13322 594 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 MFSD4BQ5TF39 518 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 ADCK1Q86TW2 530 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 WDR60Q8WVS4 1066 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 FAM192AQ9GZU8 254 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 SELPP16109 830 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 TCN1P20061 433 aaPredicted RBP11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 TYK2P29597 1187 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 GNA15P30679 374 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 CREMQ03060 361 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 ST3GAL1Q11201 340 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 MTM1Q13496 603 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 C16orf72Q14CZ0 275 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 FIBCD1Q8N539 461 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 TPCN2Q8NHX9 752 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 CMTM5Q96DZ9 223 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 TMA16Q96EY4 203 aaKnown RBP11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 HHIPL1Q96JK4 782 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 PPP1R36Q96LQ0 422 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 KLK14Q9P0G3 267 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 FARP1Q9Y4F1 1045 aaPredicted RBP11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 CYP3A7-CYP3A51PA0A087WV96 503 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 PDE2AO00408 941 aaPredicted RBP11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 AKAP10O43572 662 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 CYP3A7P24462 503 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 ACCSLQ4AC99 568 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 RIBC1Q8N443 379 aaPredicted RBP11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 CYP2W1Q8TAV3 490 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 ATP6V1E2Q96A05 226 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 FAM118BQ9BPY3 351 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 SEMA4AQ9H3S1 761 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 RSAD1Q9HA92 442 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 FAM50BQ9Y247 325 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 HEY1Q9Y5J3 304 aa11.8□□□□□ -0.52
NPC1L1-201ENST00000289547 ZMYM2Q9UBW7 1377 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 C2CD2LO14523 706 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 COMTP21964 271 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 MLH1P40692 756 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 SPIRE2Q8WWL2 714 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 TRPC7Q9HCX4 862 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 ARHGAP20Q9P2F6 1191 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 Q9Y3F1 56 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 FGBP02675 491 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 IGFBP4P22692 258 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 COILP38432 576 aaPredicted RBP11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 C1QTNF8P60827 252 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 IFI35P80217 286 aaPredicted RBP11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 SHROOM1Q2M3G4 852 aaPredicted RBP11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 FBXO46Q6PJ61 603 aaPredicted RBP11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 MTHFD1LQ6UB35 978 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 LRRC74BQ6ZQY2 392 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 CREG2Q8IUH2 290 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 PBXIP1Q96AQ6 731 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 MTMR8Q96EF0 704 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 INPP4AQ96PE3 977 aaPredicted RBP11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 GAS2L1Q99501 681 aaPredicted RBP11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 ADAM2Q99965 735 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 SEPT3Q9UH03 358 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 SUN2Q9UH99 717 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 SMIM22K7EJ46 135 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 NEMP1O14524 444 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 P4HA2O15460 535 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 RARRES1P49788 294 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 RAP1GDS1P52306 607 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 TFDP2Q14188 446 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 FLOT2Q14254 428 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 CYGBQ8WWM9 190 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 KAT2BQ92831 832 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms