RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 WDR44Q5JSH3 913 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 GPR158Q5T848 1215 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 TCERG1LQ5VWI1 586 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 CWF19L1Q69YN2 538 aaKnown RBP9.71□□□□□ -0.86
HMGN1-201ENST00000288344 TXNDC8Q6A555 127 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 C11orf57Q6ZUT1 292 aaPredicted RBP9.71□□□□□ -0.86
HMGN1-201ENST00000288344 DENND5BQ6ZUT9 1274 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 GPRIN1Q7Z2K8 1008 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 TTC30AQ86WT1 665 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 NUP93Q8N1F7 819 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 ZNF276Q8N554 614 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 TTC39CQ8N584 583 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 USP13Q92995 863 aaPredicted RBP9.71□□□□□ -0.86
HMGN1-201ENST00000288344 JAKMIP2Q96AA8 810 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 SMARCD1Q96GM5 515 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 CYP2S1Q96SQ9 504 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 KXD1Q9BQD3 176 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 DUSP16Q9BY84 665 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 PNPLA8Q9NP80 782 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 OSER1Q9NX31 292 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 ZMYM5Q9UJ78 669 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 CCL26Q9Y258 94 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.71□□□□□ -0.86
HMGN1-201ENST00000288344 C2orf78A6NCI8 922 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 OTOL1A6NHN0 477 aaPredicted RBP9.7□□□□□ -0.86
HMGN1-201ENST00000288344 BECN2A8MW95 431 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 O00370 1275 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 PI15O43692 258 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 GREM1O60565 184 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 FGFR1OPO95684 399 aaKnown RBP9.7□□□□□ -0.86
HMGN1-201ENST00000288344 OAS1P00973 400 aaKnown RBP9.7□□□□□ -0.86
HMGN1-201ENST00000288344 CCDC192P0DO97 292 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 PSMC3P17980 439 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 CD58P19256 250 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 DDX6P26196 483 aaKnown RBP eCLIP9.7□□□□□ -0.861e-5■■■□□ 17.8
HMGN1-201ENST00000288344 PPP3CCP48454 512 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 CLCN5P51795 746 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 KIF11P52732 1056 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 APBA1Q02410 837 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 TAF10Q12962 218 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 VEPH1Q14D04 833 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 CCDC40Q4G0X9 1142 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 SLC44A4Q53GD3 710 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 CCDC183Q5T5S1 534 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 PM20D1Q6GTS8 502 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 TRIM65Q6PJ69 517 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 SCN4BQ8IWT1 228 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 FBXL6Q8N531 539 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 KIAA1958Q8N8K9 716 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 ANKRD52Q8NB46 1076 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 SLC35F5Q8WV83 523 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 OVCA2Q8WZ82 227 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 E2F7Q96AV8 911 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 NAA15Q9BXJ9 866 aaKnown RBP9.7□□□□□ -0.86
HMGN1-201ENST00000288344 IMPG2Q9BZV3 1241 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 DMAP1Q9NPF5 467 aaPredicted RBP9.7□□□□□ -0.86
HMGN1-201ENST00000288344 FAM49BQ9NUQ9 324 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 UXTQ9UBK9 157 aaPredicted RBP9.7□□□□□ -0.86
HMGN1-201ENST00000288344 AJAP1Q9UKB5 411 aaPredicted RBP9.7□□□□□ -0.86
HMGN1-201ENST00000288344 MYH10P35580 1976 aa9.7□□□□□ -0.86
HMGN1-201ENST00000288344 TULP2O00295 520 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 CHADO15335 359 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 PAEPP09466 180 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 GLULP15104 373 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 TBXAS1P24557 533 aaPredicted RBP9.69□□□□□ -0.86
HMGN1-201ENST00000288344 AVPR2P30518 371 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 SLC5A3P53794 718 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 VCPP55072 806 aaKnown RBP9.69□□□□□ -0.86
HMGN1-201ENST00000288344 MAP3K7CLP57077 242 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 SLC7A9P82251 487 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 LRMPQ12912 555 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 ZNF77Q15935 545 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 CNGA2Q16280 664 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 MAN2A1Q16706 1144 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 VWA3BQ502W6 1294 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 ZNF394Q53GI3 561 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 TCP11X2Q5H9J9 407 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 GJB7Q6PEY0 223 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 BLOC1S3Q6QNY0 202 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 LCLAT1Q6UWP7 414 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 RRAGAQ7L523 313 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 SCD5Q86SK9 330 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 RETREG3Q86VR2 466 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 TMEM105Q8N8V8 129 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 MAB21L3Q8N8X9 362 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 DEPDC1BQ8WUY9 529 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 TSC1Q92574 1164 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 PBXIP1Q96AQ6 731 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 NT5C1BQ96P26 610 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 TRMT61BQ9BVS5 477 aaKnown RBP9.69□□□□□ -0.86
HMGN1-201ENST00000288344 INTS2Q9H0H0 1204 aaKnown RBP9.69□□□□□ -0.86
HMGN1-201ENST00000288344 SMG9Q9H0W8 520 aaKnown RBP9.69□□□□□ -0.86
HMGN1-201ENST00000288344 NDST4Q9H3R1 872 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 TDP1Q9NUW8 608 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 FANCLQ9NW38 375 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 CHORDC1Q9UHD1 332 aaPredicted RBP9.69□□□□□ -0.86
HMGN1-201ENST00000288344 KIAA1257Q9ULG3 409 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 ARHGAP26Q9UNA1 814 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 SCML2Q9UQR0 700 aa9.69□□□□□ -0.86
HMGN1-201ENST00000288344 NFE2L3Q9Y4A8 694 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms