RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ISCUQ9H1K1 167 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 TFR2Q9UP52 801 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 IL10P22301 178 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 YWHAQP27348 245 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 TMEM119Q4V9L6 283 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 KIAA0895Q8NCT3 520 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 VPS37AQ8NEZ2 397 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 ATXN3LQ9H3M9 355 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 YY1AP1Q9H869 796 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 RIC8BQ9NVN3 520 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 TEKT2Q9UIF3 430 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 SYCE1LA8MT33 242 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 LACTBL1A8MY62 500 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 LRRC74AQ0VAA2 488 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 PLD1Q13393 1074 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 TTC39BQ5VTQ0 682 aaPredicted RBP19.19■□□□□ 0.66
PCDH1-201ENST00000287008 DENND5BQ6ZUT9 1274 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 MOB2Q70IA6 237 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 MAP4K3Q8IVH8 894 aa19.19■□□□□ 0.66
PCDH1-201ENST00000287008 THG1LQ9NWX6 298 aaKnown RBP19.19■□□□□ 0.66
PCDH1-201ENST00000287008 NOP53Q9NZM5 478 aaKnown RBP19.19■□□□□ 0.66
PCDH1-201ENST00000287008 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.19■□□□□ 0.66
PCDH1-201ENST00000287008 NCAM2O15394 837 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 FKTNO75072 461 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 CKBP12277 381 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 PTPN7P35236 360 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 ATP6V1E1P36543 226 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 MTA1Q13330 715 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 CLEC16AQ2KHT3 1053 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 RGS9BPQ6ZS82 235 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 COPS5Q92905 334 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 WWOXQ9NZC7 414 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 USP20Q9Y2K6 914 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 E2F8A0AVK6 867 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 VPS26AO75436 327 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 TBX4P57082 545 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 GUCY1A3Q02108 690 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 ATG4AQ8WYN0 398 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 NMRK2Q9NPI5 230 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 TRIM49D1C9J1S8 452 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 SRP72O76094 671 aaKnown RBP19.18■□□□□ 0.66
PCDH1-201ENST00000287008 SGO1Q5FBB7 561 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 EXD1Q8NHP7 514 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 PORCNQ9H237 461 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 VIPAS39Q9H9C1 493 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 SCUBE2Q9NQ36 999 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 GIMAP4Q9NUV9 329 aa19.18■□□□□ 0.66
PCDH1-201ENST00000287008 SDR42E2A6NKP2 422 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 HDAC4P56524 1084 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 ADIGQ0VDE8 80 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 KRT72Q14CN4 511 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 CRY2Q49AN0 593 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 MMGT1Q8N4V1 131 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 SLC20A1Q8WUM9 679 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 NAF1Q96HR8 494 aaKnown RBP19.17■□□□□ 0.66
PCDH1-201ENST00000287008 ZBTB45Q96K62 511 aaPredicted RBP19.17■□□□□ 0.66
PCDH1-201ENST00000287008 LRRC40Q9H9A6 602 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 SELENONQ9NZV5 590 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 ARL2BPQ9Y2Y0 163 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 FAM32AQ9Y421 112 aaKnown RBP19.17■□□□□ 0.66
PCDH1-201ENST00000287008 SNX5Q9Y5X3 404 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 PCYOX1LQ8NBM8 494 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 SGF29Q96ES7 293 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 TBCBQ99426 244 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 PRPF18Q99633 342 aaKnown RBP19.17■□□□□ 0.66
PCDH1-201ENST00000287008 WARS2Q9UGM6 360 aaKnown RBP19.17■□□□□ 0.66
PCDH1-201ENST00000287008 ALDH18A1P54886 795 aaKnown RBP19.17■□□□□ 0.66
PCDH1-201ENST00000287008 KDSRQ06136 332 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 GPR142Q7Z601 462 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 APBA2Q99767 749 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 ADGRE3Q9BY15 652 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 CLPBQ9H078 707 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 RAMP2O60895 175 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 VCLP18206 1134 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 PRAMEF19Q5SWL8 479 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 MARC1Q5VT66 337 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 CDKAL1Q5VV42 579 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 PATL1Q86TB9 770 aaKnown RBP19.17■□□□□ 0.66
PCDH1-201ENST00000287008 SH2D3CQ8N5H7 860 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 RFWD2Q8NHY2 731 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 SERPINB11Q96P15 392 aa19.17■□□□□ 0.66
PCDH1-201ENST00000287008 UXTQ9UBK9 157 aaPredicted RBP19.17■□□□□ 0.66
PCDH1-201ENST00000287008 SCNN1BP51168 640 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 AP2B1P63010 937 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 EIF2B5Q13144 721 aaKnown RBP19.16■□□□□ 0.66
PCDH1-201ENST00000287008 ZNF268Q14587 947 aaPredicted RBP19.16■□□□□ 0.66
PCDH1-201ENST00000287008 NFIL3Q16649 462 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 AGAP9Q5VTM2 703 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 ZNF571Q7Z3V5 609 aaPredicted RBP19.16■□□□□ 0.66
PCDH1-201ENST00000287008 KCTD10Q9H3F6 313 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 NT5MQ9NPB1 228 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 STX18Q9P2W9 335 aaKnown RBP19.16■□□□□ 0.66
PCDH1-201ENST00000287008 SNCAIPQ9Y6H5 919 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 MROH7Q68CQ1 1323 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 ADGRA2Q96PE1 1338 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 COL3A1P02461 1466 aaPredicted RBP19.16■□□□□ 0.66
PCDH1-201ENST00000287008 RTN3O95197 1032 aaPredicted RBP19.16■□□□□ 0.66
PCDH1-201ENST00000287008 CRTAMO95727 393 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 ZDHHC17Q8IUH5 632 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 SLC35C1Q96A29 364 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms