RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 IMPDH2P12268 514 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 ACOT2P49753 483 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 ARFIP2P53365 341 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 YWHAEP62258 255 aaKnown RBP10.82□□□□□ -0.68
SKA1-201ENST00000285116 DSG1Q02413 1049 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 LSAMPQ13449 338 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 SEPT7Q16181 437 aaKnown RBP10.82□□□□□ -0.68
SKA1-201ENST00000285116 WDR78Q5VTH9 848 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 RINLQ6ZS11 566 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 TRIM74Q86UV6 250 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 TRIM73Q86UV7 250 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 SGIP1Q9BQI5 828 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 UNC80Q8N2C7 3258 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 A0A0G2JND7 137 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 K7ERI5 159 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 MAGEC1O60732 1142 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 ZCCHC18P0CG32 403 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 POLR2BP30876 1174 aaKnown RBP10.81□□□□□ -0.68
SKA1-201ENST00000285116 CDK16Q00536 496 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 ZBTB16Q05516 673 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 PRKD1Q15139 912 aaPredicted RBP10.81□□□□□ -0.68
SKA1-201ENST00000285116 TARBP2Q15633 366 aaKnown RBP10.81□□□□□ -0.68
SKA1-201ENST00000285116 LMBRD2Q68DH5 695 aaPredicted RBP10.81□□□□□ -0.68
SKA1-201ENST00000285116 CMASQ8NFW8 434 aaPredicted RBP10.81□□□□□ -0.68
SKA1-201ENST00000285116 OR5B17Q8NGF7 314 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 DEPTORQ8TB45 409 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 APOPT1Q96IL0 206 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 CYTH2Q99418 400 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 DDX50Q9BQ39 737 aaKnown RBP10.81□□□□□ -0.68
SKA1-201ENST00000285116 TMEM121Q9BTD3 319 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 RPAP3Q9H6T3 665 aaPredicted RBP10.81□□□□□ -0.68
SKA1-201ENST00000285116 MANSC1Q9H8J5 431 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 HOMER2Q9NSB8 354 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 DNAJB4Q9UDY4 337 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 WASF2Q9Y6W5 498 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 IQANK1A0A1B0GTG1 560 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 ENDOD1O94919 500 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 RARBP10826 455 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 ADRA1DP25100 572 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 RPL22P35268 128 aaKnown RBP10.81□□□□□ -0.68
SKA1-201ENST00000285116 PGM1P36871 562 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 EFNA5P52803 228 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 HADHQ16836 314 aaKnown RBP10.81□□□□□ -0.68
SKA1-201ENST00000285116 FNBP1LQ5T0N5 605 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 KAZNQ674X7 775 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 DPY19L2Q6NUT2 758 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 DCUN1D2Q6PH85 259 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 IZUMO2Q6UXV1 221 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 RBM12BQ8IXT5 1001 aaKnown RBP10.81□□□□□ -0.68
SKA1-201ENST00000285116 ST13P4Q8IZP2 240 aaPredicted RBP10.81□□□□□ -0.68
SKA1-201ENST00000285116 RAB3IL1Q8TBN0 382 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 SLC44A1Q8WWI5 657 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 TUBGCP5Q96RT8 1024 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 FAM124BQ9H5Z6 455 aaPredicted RBP10.81□□□□□ -0.68
SKA1-201ENST00000285116 ZNF180Q9UJW8 692 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 TBC1D30Q9Y2I9 924 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 WDR90Q96KV7 1748 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 APOC4-APOC2K7ER74 178 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 ADCY3O60266 1144 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 APOC2P02655 101 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 KDELR1P24390 212 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 CRABP2P29373 138 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 MAGEA6P43360 314 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 OTUD4Q01804 1114 aaKnown RBP10.81□□□□□ -0.68
SKA1-201ENST00000285116 TFDP1Q14186 410 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 MSS51Q4VC12 460 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 C9orf131Q5VYM1 1079 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 TXNRD3NBQ6F5E7 133 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 MARK2Q7KZI7 788 aaKnown RBP10.81□□□□□ -0.68
SKA1-201ENST00000285116 PDIK1LQ8N165 341 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.81□□□□□ -0.68
SKA1-201ENST00000285116 ACTL9Q8TC94 416 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 TCP10LQ8TDR4 215 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 PPP2R3CQ969Q6 453 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 RTP4Q96DX8 246 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 ECSITQ9BQ95 431 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 KCNK13Q9HB14 408 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 KLHL11Q9NVR0 708 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 CLEC11AQ9Y240 323 aa10.81□□□□□ -0.68
SKA1-201ENST00000285116 CTDP1Q9Y5B0 961 aaPredicted RBP10.81□□□□□ -0.68
SKA1-201ENST00000285116 SCN4AP35499 1836 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 WNT10BO00744 389 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 ANPEPP15144 967 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 SERPINB3P29508 390 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 GJC1P36383 396 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 GABRB2P47870 512 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 OVGP1Q12889 678 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 DBN1Q16643 649 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 C6orf163Q5TEZ5 329 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 ANKRD22Q5VYY1 191 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 C3orf62Q6ZUJ4 267 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 NET1Q7Z628 596 aaPredicted RBP10.8□□□□□ -0.68
SKA1-201ENST00000285116 NME8Q8N427 588 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 ARFGAP1Q8N6T3 406 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 CCDC110Q8TBZ0 833 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 FAM84AQ96KN4 292 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 LBHD1Q9BQE6 289 aaPredicted RBP10.8□□□□□ -0.68
SKA1-201ENST00000285116 CISHQ9NSE2 258 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 TEX264Q9Y6I9 313 aa10.8□□□□□ -0.68
SKA1-201ENST00000285116 MGAMO43451 1857 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms