RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PYROXD1Q8WU10 500 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 ACO2Q99798 780 aaKnown RBP13.51□□□□□ -0.25
C9orf3-201ENST00000277198 GDF15Q99988 308 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 PAIP2Q9BPZ3 127 aaKnown RBP13.51□□□□□ -0.25
C9orf3-201ENST00000277198 TMEM121Q9BTD3 319 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 AP5M1Q9H0R1 490 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 ACSS3Q9H6R3 686 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 C15orf41Q9Y2V0 281 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 LOC102724159A0A0B4J2E5 919 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 TRAFD1O14545 582 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-201ENST00000277198 ANP32DO95626 131 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 EDN1P05305 212 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 KRT3P12035 628 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 ATP2A2P16615 1042 aaKnown RBP13.5□□□□□ -0.25
C9orf3-201ENST00000277198 PSMA2P25787 234 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 RPA3P35244 121 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-201ENST00000277198 RNASELQ05823 741 aaKnown RBP13.5□□□□□ -0.25
C9orf3-201ENST00000277198 DNAJC3Q13217 504 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 FASTKD3Q14CZ7 662 aaKnown RBP13.5□□□□□ -0.25
C9orf3-201ENST00000277198 PWP2Q15269 919 aaKnown RBP13.5□□□□□ -0.25
C9orf3-201ENST00000277198 MAPK6Q16659 721 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 SLC45A4Q5BKX6 768 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 HHATQ5VTY9 493 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 ZBTB8OSQ8IWT0 167 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 TBC1D31Q96DN5 1066 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 PCYT2Q99447 389 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 TCHPQ9BT92 498 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 MTMR12Q9C0I1 747 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 VPS11Q9H270 941 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 ETNK1Q9HBU6 452 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 BATF3Q9NR55 127 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 RABGEF1Q9UJ41 708 aa13.5□□□□□ -0.25
C9orf3-201ENST00000277198 SPAG7O75391 227 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 IFNB1P01574 187 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 TNNC2P02585 160 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 ETS1P14921 441 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 UBA1P22314 1058 aaKnown RBP13.49□□□□□ -0.25
C9orf3-201ENST00000277198 SSTR3P32745 418 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-201ENST00000277198 ASPAP45381 313 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 GPX6P59796 221 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 PDE4CQ08493 712 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 ZNF699Q32M78 642 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 FAM47EQ6ZV65 393 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 VSIG1Q86XK7 387 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 PLCD3Q8N3E9 789 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 MAB21L3Q8N8X9 362 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 GPATCH11Q8N954 259 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 PCSK9Q8NBP7 692 aaKnown RBP13.49□□□□□ -0.25
C9orf3-201ENST00000277198 ACTL9Q8TC94 416 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 PRPF31Q8WWY3 499 aaKnown RBP13.49□□□□□ -0.25
C9orf3-201ENST00000277198 SEPT1Q8WYJ6 367 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 N4BP2L2Q92802 583 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-201ENST00000277198 GLT1D1Q96MS3 346 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 XYLT2Q9H1B5 865 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 FAM124BQ9H5Z6 455 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-201ENST00000277198 CYLDQ9NQC7 956 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 KIAA1217Q5T5P2 1943 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-201ENST00000277198 E7ENQ6 273 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 C2CD2LO14523 706 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 ABLIM1O14639 778 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 LRCH4O75427 683 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 SPAG6O75602 509 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 PROZP22891 400 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 KDELR1P24390 212 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 STIP1P31948 543 aaKnown RBP13.49□□□□□ -0.25
C9orf3-201ENST00000277198 TNFSF9P41273 254 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 OTUD4Q01804 1114 aaKnown RBP13.49□□□□□ -0.25
C9orf3-201ENST00000277198 ARHGAP1Q07960 439 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 FAAP100Q0VG06 881 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 MYO1EQ12965 1108 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 TTLL4Q14679 1199 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 CRYMQ14894 314 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 C1orf53Q5VUE5 145 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 FYB2Q5VWT5 728 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 TXNRD3NBQ6F5E7 133 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 METTL7BQ6UX53 244 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 TSHZ1Q6ZSZ6 1077 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 PDIK1LQ8N165 341 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 CMASQ8NFW8 434 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-201ENST00000277198 CFAP61Q8NHU2 1237 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 AFG1LQ8WV93 481 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 RSAD2Q8WXG1 361 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 TFAP2BQ92481 460 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 CPT1BQ92523 772 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 ERP27Q96DN0 273 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 ANKRD36BP1Q96IX9 119 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 TUBB6Q9BUF5 446 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 MYLK2Q9H1R3 596 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 SAR1AQ9NR31 198 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 CHKBQ9Y259 395 aa13.49□□□□□ -0.25
C9orf3-201ENST00000277198 CLUHO75153 1309 aa13.48□□□□□ -0.25
C9orf3-201ENST00000277198 IGKV6-21A0A0C4DH24 114 aa13.48□□□□□ -0.25
C9orf3-201ENST00000277198 APOC4-APOC2K7ER74 178 aa13.48□□□□□ -0.25
C9orf3-201ENST00000277198 CST8O60676 142 aa13.48□□□□□ -0.25
C9orf3-201ENST00000277198 APOC2P02655 101 aa13.48□□□□□ -0.25
C9orf3-201ENST00000277198 MYL3P08590 195 aa13.48□□□□□ -0.25
C9orf3-201ENST00000277198 HARSP12081 509 aaKnown RBP13.48□□□□□ -0.25
C9orf3-201ENST00000277198 KRT4P19013 534 aa13.48□□□□□ -0.25
C9orf3-201ENST00000277198 RFC1P35251 1148 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms