RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 LRCH4O75427 683 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 GRAP2O75791 330 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 PROCP04070 461 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 APRTP07741 180 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 DHRS4L1P0CG22 281 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 TNFSF9P41273 254 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 MRPS5P82675 430 aaKnown RBP13.44□□□□□ -0.26
COL8A1-202ENST00000273342 DRICH1Q6PGQ1 229 aaPredicted RBP13.44□□□□□ -0.26
COL8A1-202ENST00000273342 C15orf39Q6ZRI6 1047 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 PCGF5Q86SE9 256 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 CDR2LQ86X02 465 aaPredicted RBP13.44□□□□□ -0.26
COL8A1-202ENST00000273342 UNC5BQ8IZJ1 945 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 WDTC1Q8N5D0 677 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 OR6Y1Q8NGX8 325 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 SLC44A1Q8WWI5 657 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 TMEM39BQ9GZU3 492 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 QTRT2Q9H974 415 aaKnown RBP13.44□□□□□ -0.26
COL8A1-202ENST00000273342 DMAP1Q9NPF5 467 aaPredicted RBP13.44□□□□□ -0.26
COL8A1-202ENST00000273342 ADAMTS6Q9UKP5 1117 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 TTLL13PA6NNM8 815 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 F7P08709 466 aaPredicted RBP13.44□□□□□ -0.26
COL8A1-202ENST00000273342 KRT3P12035 628 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 KCNA4P22459 653 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 RAP1GAPP47736 663 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 CDK7P50613 346 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 MYL6P60660 151 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 MED21Q13503 144 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 HIC1Q14526 733 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 DLGAP5Q15398 846 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 SPDYAQ5MJ70 313 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 TRMT10BQ6PF06 316 aaKnown RBP13.44□□□□□ -0.26
COL8A1-202ENST00000273342 PODNQ7Z5L7 613 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 NET1Q7Z628 596 aaPredicted RBP13.44□□□□□ -0.26
COL8A1-202ENST00000273342 MYLK4Q86YV6 388 aaPredicted RBP13.44□□□□□ -0.26
COL8A1-202ENST00000273342 CRLF3Q8IUI8 442 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 ST13P4Q8IZP2 240 aaPredicted RBP13.44□□□□□ -0.26
COL8A1-202ENST00000273342 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.44□□□□□ -0.26
COL8A1-202ENST00000273342 DRAXINQ8NBI3 349 aaPredicted RBP13.44□□□□□ -0.26
COL8A1-202ENST00000273342 GCNAQ96QF7 691 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 CENPKQ9BS16 269 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 ZNF341Q9BYN7 854 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 MMADHCQ9H3L0 296 aaPredicted RBP13.44□□□□□ -0.26
COL8A1-202ENST00000273342 SSU72Q9NP77 194 aaKnown RBP13.44□□□□□ -0.26
COL8A1-202ENST00000273342 DDX18Q9NVP1 670 aaKnown RBP13.44□□□□□ -0.26
COL8A1-202ENST00000273342 PLA2G4CQ9UP65 541 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 NR2E3Q9Y5X4 410 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 UBIAD1Q9Y5Z9 338 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 ITM2AO43736 263 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 ATP6V1B1P15313 513 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 NCF2P19878 526 aaPredicted RBP13.43□□□□□ -0.26
COL8A1-202ENST00000273342 RXRBP28702 533 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 RAP1GDS1P52306 607 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 BTKQ06187 659 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 TRMT5Q32P41 509 aaKnown RBP13.43□□□□□ -0.26
COL8A1-202ENST00000273342 MMEL1Q495T6 779 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 RABGAP1LQ5R372 815 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 ARHGEF16Q5VV41 709 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 TRIM72Q6ZMU5 477 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 PPP1R36Q96LQ0 422 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 MTMR12Q9C0I1 747 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 WWP1Q9H0M0 922 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 PREBQ9HCU5 417 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 ACSS2Q9NR19 701 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 SMYD2Q9NRG4 433 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 TBC1D22BQ9NU19 505 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 RHBDL2Q9NX52 303 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 CNTN3Q9P232 1028 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 ZC3H7BQ9UGR2 993 aaKnown RBP13.43□□□□□ -0.26
COL8A1-202ENST00000273342 FZD1Q9UP38 647 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 AK5Q9Y6K8 562 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 ZNF536O15090 1300 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 MCF2LO15068 1137 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 MAGEC1O60732 1142 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 KDELR1P24390 212 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 RPL10AP62906 217 aaKnown RBP13.43□□□□□ -0.26
COL8A1-202ENST00000273342 PGM5Q15124 567 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 PPP6R3Q5H9R7 873 aaPredicted RBP13.43□□□□□ -0.26
COL8A1-202ENST00000273342 OLFML2BQ68BL8 750 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 DENND1BQ6P3S1 775 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 PAOXQ6QHF9 649 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 MARK2Q7KZI7 788 aaKnown RBP13.43□□□□□ -0.26
COL8A1-202ENST00000273342 HPS6Q86YV9 775 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 APLFQ8IW19 511 aaPredicted RBP13.43□□□□□ -0.26
COL8A1-202ENST00000273342 GDPD5Q8WTR4 605 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 CLEC4DQ8WXI8 215 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 OPTNQ96CV9 577 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 PHF12Q96QT6 1004 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 NR1H4Q96RI1 486 aaPredicted RBP13.43□□□□□ -0.26
COL8A1-202ENST00000273342 IMPG2Q9BZV3 1241 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 GPATCH2LQ9NWQ4 482 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 FOCADQ5VW36 1801 aa13.43□□□□□ -0.26
COL8A1-202ENST00000273342 A0A088AWK7 358 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 C3orf70A6NLC5 250 aaPredicted RBP13.42□□□□□ -0.26
COL8A1-202ENST00000273342 H0YIN7 160 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 HNRNPRO43390 633 aaKnown RBP13.42□□□□□ -0.26
COL8A1-202ENST00000273342 ZC3H11AO75152 810 aaKnown RBP eCLIP13.42□□□□□ -0.26
COL8A1-202ENST00000273342 TGDSO95455 350 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 APBA3O96018 575 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 EDN1P05305 212 aa13.42□□□□□ -0.26
COL8A1-202ENST00000273342 CAP2P40123 477 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms