RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 KRT6BP04259 564 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 PRDX5P30044 214 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 KRT6CP48668 564 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 PCSK7Q16549 785 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 FAM98BQ52LJ0 330 aaKnown RBP8.24□□□□□ -1.09
LIMD1-201ENST00000273317 ZRANB3Q5FWF4 1079 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 MOXD1Q6UVY6 613 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 ARID3BQ8IVW6 561 aaPredicted RBP8.24□□□□□ -1.09
LIMD1-201ENST00000273317 WDR48Q8TAF3 677 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 BDH2Q9BUT1 245 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 RAD21L1Q9H4I0 556 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 TMCO1Q9UM00 188 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 CNTNAP5Q8WYK1 1306 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 CENPXA8MT69 81 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 RARGP13631 454 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 SLC29A2Q14542 456 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 DDR2Q16832 855 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 SGO1Q5FBB7 561 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 ARMC3Q5W041 872 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 IGDCC4Q8TDY8 1250 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 THUMPD3Q9BV44 507 aaKnown RBP8.24□□□□□ -1.09
LIMD1-201ENST00000273317 LRRC40Q9H9A6 602 aa8.24□□□□□ -1.09
LIMD1-201ENST00000273317 PNMA8CA0A1B0GUJ8 204 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 ATMINO43313 823 aaPredicted RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 TCN1P20061 433 aaPredicted RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 TDRD5Q8NAT2 981 aaKnown RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 EMILIN2Q9BXX0 1053 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 SCUBE2Q9NQ36 999 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 GGT7Q9UJ14 662 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 KLHL41O60662 606 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 OASLQ15646 514 aaKnown RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 OOSP2Q86WS3 158 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 CACNA2D2Q9NY47 1150 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 ERAP1Q9NZ08 941 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 POLG2Q9UHN1 485 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 EGFRP00533 1210 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 MYBP10242 640 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 COX10Q12887 443 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 MTMR2Q13614 643 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 TSC22D1Q15714 1073 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 LMBRD2Q68DH5 695 aaPredicted RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 IL31Q6EBC2 164 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 C11orf88Q6PI97 169 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 RAD9BQ6WBX8 426 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 LRRC34Q8IZ02 419 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 CHST13Q8NET6 341 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 SLITRK1Q96PX8 696 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 PPP1R10Q96QC0 940 aaKnown RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 TADA2AO75478 443 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 F9P00740 461 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 TXNP10599 105 aaKnown RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 GALNTL6Q49A17 601 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 CLEC4MQ9H2X3 399 aaPredicted RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 PPP1R3GB7ZBB8 358 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 AKR1B1P15121 316 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 PPP2R1BP30154 601 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 CCT8P50990 548 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 DCAF6Q58WW2 860 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 ARMC4Q5T2S8 1044 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 DENND1BQ6P3S1 775 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 ARIH1Q9Y4X5 557 aaPredicted RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 USP31Q70CQ4 1352 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 PRRG1O14668 218 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 ZBTB39O15060 712 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 RGS5O15539 181 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 DYRK3O43781 588 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 PDE9AO76083 593 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 BCL10O95999 233 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 ITGA4P13612 1032 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 HLFQ16534 295 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 RSBN1Q5VWQ0 802 aaPredicted RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 CROCCP3Q8IVE0 287 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 SLC25A41Q8N5S1 370 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 ARL10Q8N8L6 244 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 STARD8Q92502 1023 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 TMEM143Q96AN5 459 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 MTIF3Q9H2K0 278 aaKnown RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 METTL5Q9NRN9 209 aaKnown RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 RPS6KL1Q9Y6S9 549 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 ASMTLO95671 621 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 SSTR3P32745 418 aaPredicted RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 FXR1P51114 621 aaKnown RBP eCLIP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 KPNA1P52294 538 aaPredicted RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 CDH18Q13634 790 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 DENND5BQ6ZUT9 1274 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 ERO1BQ86YB8 467 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 NOA1Q8NC60 698 aaKnown RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 EPS8L3Q8TE67 593 aaKnown RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 REPS1Q96D71 796 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 TMEM120AQ9BXJ8 343 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 UBXN6Q9BZV1 441 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 NCKIPSDQ9NZQ3 722 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 HEY2Q9UBP5 337 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 RBP3P10745 1247 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 SERPINB5P36952 375 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 MLH1P40692 756 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 CCNG1P51959 295 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 FOXO4P98177 505 aa8.23□□□□□ -1.09
LIMD1-201ENST00000273317 SHROOM1Q2M3G4 852 aaPredicted RBP8.23□□□□□ -1.09
LIMD1-201ENST00000273317 FIGNQ5HY92 759 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms