RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 ZMIZ2Q8NF64 920 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 RXFP2Q8WXD0 754 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 CFAP57Q96MR6 1250 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 PKMYT1Q99640 499 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 GPR62Q9BZJ7 368 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 ADAM28Q9UKQ2 775 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 TTC7AQ9ULT0 858 aaPredicted RBP13.13□□□□□ -0.31
CAPN9-201ENST00000271971 HOXA2O43364 376 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 TIMP1P01033 207 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 PDGFRAP16234 1089 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 TYMPP19971 482 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 GPD1P21695 349 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 BDNFP23560 247 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 IL1R2P27930 398 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 SLC8A3P57103 927 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 DEFB103AP81534 67 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 ATP11AP98196 1134 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 ZFYVE27Q5T4F4 411 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 C8orf74Q6P047 294 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 CCNI2Q6ZMN8 369 aaPredicted RBP13.12□□□□□ -0.31
CAPN9-201ENST00000271971 CEP57Q86XR8 500 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 CCDC50Q8IVM0 306 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 FNIP1Q8TF40 1166 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 BCL7CQ8WUZ0 217 aaPredicted RBP13.12□□□□□ -0.31
CAPN9-201ENST00000271971 ZWILCHQ9H900 591 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.12□□□□□ -0.31
CAPN9-201ENST00000271971 MYO16Q9Y6X6 1858 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 EBAG9O00559 213 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 RAG1P15918 1043 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 TFE3P19532 575 aaPredicted RBP13.12□□□□□ -0.31
CAPN9-201ENST00000271971 EN2P19622 333 aaPredicted RBP13.12□□□□□ -0.31
CAPN9-201ENST00000271971 RPL34P49207 117 aaKnown RBP13.12□□□□□ -0.31
CAPN9-201ENST00000271971 IRAK1P51617 712 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 SLC25A11Q02978 314 aaKnown RBP13.12□□□□□ -0.31
CAPN9-201ENST00000271971 KCNT1Q5JUK3 1230 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 FAM171A1Q5VUB5 890 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 FAM171BQ6P995 826 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 THEM5Q8N1Q8 247 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 LRRC43Q8N309 656 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 RNF25Q96BH1 459 aaPredicted RBP13.12□□□□□ -0.31
CAPN9-201ENST00000271971 HSFY1Q96LI6 401 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 MRPL9Q9BYD2 267 aaKnown RBP13.12□□□□□ -0.31
CAPN9-201ENST00000271971 PCSK1NQ9UHG2 260 aa13.12□□□□□ -0.31
CAPN9-201ENST00000271971 DMGDHQ9UI17 866 aaKnown RBP13.12□□□□□ -0.31
CAPN9-201ENST00000271971 ZSCAN5CA6NGD5 496 aaPredicted RBP13.11□□□□□ -0.31
CAPN9-201ENST00000271971 KRT1P04264 644 aa13.11□□□□□ -0.31
CAPN9-201ENST00000271971 GALTP07902 379 aa13.11□□□□□ -0.31
CAPN9-201ENST00000271971 ZNF143P52747 638 aaPredicted RBP13.11□□□□□ -0.31
CAPN9-201ENST00000271971 TSPY1Q01534 308 aa13.11□□□□□ -0.31
CAPN9-201ENST00000271971 ADCY1Q08828 1119 aa13.11□□□□□ -0.31
CAPN9-201ENST00000271971 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
CAPN9-201ENST00000271971 SLC13A5Q86YT5 568 aaPredicted RBP13.11□□□□□ -0.31
CAPN9-201ENST00000271971 KATNAL2Q8IYT4 538 aa13.11□□□□□ -0.31
CAPN9-201ENST00000271971 SPATA18Q8TC71 538 aa13.11□□□□□ -0.31
CAPN9-201ENST00000271971 SMARCD1Q96GM5 515 aa13.11□□□□□ -0.31
CAPN9-201ENST00000271971 HEMGNQ9BXL5 484 aa13.11□□□□□ -0.31
CAPN9-201ENST00000271971 ADAM33Q9BZ11 813 aa13.11□□□□□ -0.31
CAPN9-201ENST00000271971 MCOLN1Q9GZU1 580 aa13.11□□□□□ -0.31
CAPN9-201ENST00000271971 LRRC4Q9HBW1 653 aa13.11□□□□□ -0.31
CAPN9-201ENST00000271971 GOLGA8KD6RF30 607 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 AGPSO00116 658 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 ALDH2P05091 517 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 PAX3P23760 479 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 MIPP30301 263 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 ACADSBP45954 432 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 CCDC14Q49A88 953 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 SLC39A12Q504Y0 691 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 SPATS2Q86XZ4 545 aaKnown RBP13.1□□□□□ -0.31
CAPN9-201ENST00000271971 PEBP4Q96S96 227 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 KIAA1671Q9BY89 1806 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 ARHGEF37A1IGU5 675 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 KIAA0355O15063 1070 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 RAD51CO43502 376 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 TRAPPC3O43617 180 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 DGKIO75912 1065 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 RALAP11233 206 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 RFC2P35250 354 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 GGCXP38435 758 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 TKTL1P51854 596 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 SNX16P57768 344 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 FUT10Q6P4F1 479 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 SLC26A9Q7LBE3 791 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 ZDHHC17Q8IUH5 632 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 GSPT2Q8IYD1 628 aaKnown RBP13.1□□□□□ -0.31
CAPN9-201ENST00000271971 SIX6OS1Q8N1H7 587 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 MICALL1Q8N3F8 863 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 AENQ8WTP8 325 aaKnown RBP13.1□□□□□ -0.31
CAPN9-201ENST00000271971 RAPGEF5Q92565 580 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 FAM149B1Q96BN6 582 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 SH3GL2Q99962 352 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 CNPY3Q9BT09 278 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 ULBP1Q9BZM6 244 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 NGRNQ9NPE2 291 aaKnown RBP13.1□□□□□ -0.31
CAPN9-201ENST00000271971 CYLDQ9NQC7 956 aa13.1□□□□□ -0.31
CAPN9-201ENST00000271971 ZNF638Q14966 1978 aaKnown RBP13.1□□□□□ -0.31
CAPN9-201ENST00000271971 HHLA1C9JL84 531 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 SKOR1P84550 965 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 SIX1Q15475 284 aaPredicted RBP13.09□□□□□ -0.31
CAPN9-201ENST00000271971 MFSD7Q6UXD7 560 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 HFE2Q6ZVN8 426 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms