RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 CETPP11597 493 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 IFNAR1P17181 557 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 NMT1P30419 496 aaKnown RBP13.02□□□□□ -0.33
CDH11-201ENST00000268603 PTPAQ15257 358 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 UTP15Q8TED0 518 aaKnown RBP13.02□□□□□ -0.33
CDH11-201ENST00000268603 OSBP2Q969R2 916 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 GPD1P21695 349 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 PAICSP22234 425 aaKnown RBP13.02□□□□□ -0.33
CDH11-201ENST00000268603 SARSP49591 514 aaKnown RBP13.02□□□□□ -0.33
CDH11-201ENST00000268603 SERPINH1P50454 418 aaKnown RBP13.02□□□□□ -0.33
CDH11-201ENST00000268603 BCAP31P51572 246 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 AP1S2P56377 157 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 BAATQ14032 418 aaPredicted RBP13.02□□□□□ -0.33
CDH11-201ENST00000268603 LONRF1Q17RB8 773 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 FBXO42Q6P3S6 717 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 IL17REQ8NFR9 667 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 PALLDQ8WX93 1383 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 OR6B1O95007 311 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 LSP1P33241 339 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 IL12RB1P42701 662 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 EFHC1Q5JVL4 640 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 UBASH3BQ8TF42 649 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 SLC20A1Q8WUM9 679 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 ZNF624Q9P2J8 865 aaPredicted RBP13.01□□□□□ -0.33
CDH11-201ENST00000268603 LOC100653049A0A140TA62 436 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 MAGEB2O15479 319 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 CNOT3O75175 753 aaKnown RBP13.01□□□□□ -0.33
CDH11-201ENST00000268603 KRT34O76011 436 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 KLHL2O95198 593 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 MPOP05164 745 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 RHOCP08134 193 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 TFE3P19532 575 aaPredicted RBP13.01□□□□□ -0.33
CDH11-201ENST00000268603 PTPN3P26045 913 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 ALG11Q2TAA5 492 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 MRNIPQ6NTE8 343 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 BRSK2Q8IWQ3 736 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 TFB1MQ8WVM0 346 aaKnown RBP13.01□□□□□ -0.33
CDH11-201ENST00000268603 DPP7Q9UHL4 492 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 PBRM1Q86U86 1689 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 ERBB4Q15303 1308 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 IL18RAPO95256 599 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 CHRNA5P30532 468 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 GLRA4Q5JXX5 417 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 AGAP9Q5VTM2 703 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 ATG16L2Q8NAA4 619 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 ATP6V1G3Q96LB4 118 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 GOLPH3Q9H4A6 298 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 TAF1DQ9H5J8 278 aaPredicted RBP13.01□□□□□ -0.33
CDH11-201ENST00000268603 CD209Q9NNX6 404 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 SLC35C2Q9NQQ7 365 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 WDR35Q9P2L0 1181 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 ZNF112Q9UJU3 913 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 M0QYT0 321 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 AKR1B1P15121 316 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 S100GP29377 79 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 PIGHQ14442 188 aaPredicted RBP13.01□□□□□ -0.33
CDH11-201ENST00000268603 CTXN3Q4LDR2 81 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 MROH9Q5TGP6 573 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 CCDC185Q8N715 623 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 RBBP8NLQ8NC74 664 aaPredicted RBP13.01□□□□□ -0.33
CDH11-201ENST00000268603 OSCP1Q8WVF1 389 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 TMA7Q9Y2S6 64 aaKnown RBP13.01□□□□□ -0.33
CDH11-201ENST00000268603 LOC102724159A0A0B4J2E5 919 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 CLK3P49761 638 aaKnown RBP13.01□□□□□ -0.33
CDH11-201ENST00000268603 SCARF1Q14162 830 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 PWP2Q15269 919 aaKnown RBP13.01□□□□□ -0.33
CDH11-201ENST00000268603 PREPLQ4J6C6 727 aaPredicted RBP13.01□□□□□ -0.33
CDH11-201ENST00000268603 SEPT1Q8WYJ6 367 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 TPD52L3Q96J77 140 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 VPS51Q9UID3 782 aa13.01□□□□□ -0.33
CDH11-201ENST00000268603 IL6P05231 212 aa13□□□□□ -0.33
CDH11-201ENST00000268603 ITGALP20701 1170 aa13□□□□□ -0.33
CDH11-201ENST00000268603 PRDX5P30044 214 aa13□□□□□ -0.33
CDH11-201ENST00000268603 GNA13Q14344 377 aa13□□□□□ -0.33
CDH11-201ENST00000268603 NDUFAF6Q330K2 333 aa13□□□□□ -0.33
CDH11-201ENST00000268603 MARK2Q7KZI7 788 aaKnown RBP13□□□□□ -0.33
CDH11-201ENST00000268603 LINC00523Q86TU6 105 aa13□□□□□ -0.33
CDH11-201ENST00000268603 KCNS3Q9BQ31 491 aa13□□□□□ -0.33
CDH11-201ENST00000268603 MARK1Q9P0L2 795 aa13□□□□□ -0.33
CDH11-201ENST00000268603 HERC5Q9UII4 1024 aaKnown RBP13□□□□□ -0.33
CDH11-201ENST00000268603 PRAMEF22A3QJZ6 481 aa13□□□□□ -0.33
CDH11-201ENST00000268603 TRPC5OSA6NMA1 111 aa13□□□□□ -0.33
CDH11-201ENST00000268603 CBX4O00257 560 aa13□□□□□ -0.33
CDH11-201ENST00000268603 GPR182O15218 404 aa13□□□□□ -0.33
CDH11-201ENST00000268603 ANXA9O76027 345 aa13□□□□□ -0.33
CDH11-201ENST00000268603 MTA2O94776 668 aa13□□□□□ -0.33
CDH11-201ENST00000268603 TRAF2Q12933 501 aa13□□□□□ -0.33
CDH11-201ENST00000268603 CHI3L2Q15782 390 aa13□□□□□ -0.33
CDH11-201ENST00000268603 C12orf60Q5U649 245 aa13□□□□□ -0.33
CDH11-201ENST00000268603 PGBD2Q6P3X8 592 aa13□□□□□ -0.33
CDH11-201ENST00000268603 FAM171BQ6P995 826 aa13□□□□□ -0.33
CDH11-201ENST00000268603 ULK3Q6PHR2 472 aa13□□□□□ -0.33
CDH11-201ENST00000268603 RHOBTB2Q9BYZ6 727 aa13□□□□□ -0.33
CDH11-201ENST00000268603 POLR1BQ9H9Y6 1135 aa13□□□□□ -0.33
CDH11-201ENST00000268603 SMARCAL1Q9NZC9 954 aa13□□□□□ -0.33
CDH11-201ENST00000268603 NEU2Q9Y3R4 380 aa13□□□□□ -0.33
CDH11-201ENST00000268603 FDX1P10109 184 aa13□□□□□ -0.33
CDH11-201ENST00000268603 ARL3P36405 182 aa13□□□□□ -0.33
CDH11-201ENST00000268603 CCT3P49368 545 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms