RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.62■□□□□ 0.41
RTN1-201ENST00000267484 USP18Q9UMW8 372 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 SP100P23497 879 aaPredicted RBP17.62■□□□□ 0.41
RTN1-201ENST00000267484 BST1Q10588 318 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 TTLL6Q8N841 843 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 REPS2Q8NFH8 660 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 UBA3Q8TBC4 463 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 STMN2Q93045 179 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 ANKRD27Q96NW4 1050 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 DDX50Q9BQ39 737 aaKnown RBP17.62■□□□□ 0.41
RTN1-201ENST00000267484 XYLT2Q9H1B5 865 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 STRIP2Q9ULQ0 834 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 HEY1Q9Y5J3 304 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 TEX264Q9Y6I9 313 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 BRWD3Q6RI45 1802 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 F5H423 210 aaPredicted RBP17.61■□□□□ 0.41
RTN1-201ENST00000267484 APOC4-APOC2K7ER74 178 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 APOC2P02655 101 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 IRX1P78414 480 aaPredicted RBP17.61■□□□□ 0.41
RTN1-201ENST00000267484 MRPS35P82673 323 aaKnown RBP17.61■□□□□ 0.41
RTN1-201ENST00000267484 TMPRSS15P98073 1019 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 ROR1Q01973 937 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 PPP1R2P3Q6NXS1 205 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 XRRA1Q6P2D8 792 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 TRIM50Q86XT4 487 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 TTC13Q8NBP0 860 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 C20orf27Q9GZN8 174 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 SDCBP2Q9H190 292 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 SMYD2Q9NRG4 433 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 CNTN3Q9P232 1028 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 FETUBQ9UGM5 382 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 FER1L6Q2WGJ9 1857 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 MSCO60682 206 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 RARBP10826 455 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 TAP1Q03518 808 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 SLC34A1Q06495 639 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 FLAD1Q8NFF5 587 aa17.61■□□□□ 0.41
RTN1-201ENST00000267484 B4GALT5O43286 388 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 CSDE1O75534 798 aaKnown RBP17.6■□□□□ 0.41
RTN1-201ENST00000267484 LMNAP02545 664 aaKnown RBP17.6■□□□□ 0.41
RTN1-201ENST00000267484 RNF149Q8NC42 400 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 ZNF518BQ9C0D4 1074 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 SMYD3Q9H7B4 428 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 PCDHGC3Q9UN70 934 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 HOXC6P09630 235 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 CDH5P33151 784 aaPredicted RBP17.6■□□□□ 0.41
RTN1-201ENST00000267484 ALDH18A1P54886 795 aaKnown RBP17.6■□□□□ 0.41
RTN1-201ENST00000267484 YWHAEP62258 255 aaKnown RBP17.6■□□□□ 0.41
RTN1-201ENST00000267484 SLC18A2Q05940 514 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 CHI3L2Q15782 390 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 SPDYAQ5MJ70 313 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 SAMD7Q7Z3H4 446 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 RBM15BQ8NDT2 890 aaKnown RBP17.6■□□□□ 0.41
RTN1-201ENST00000267484 TEKT4Q8WW24 435 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 SPATS2LQ9NUQ6 558 aaKnown RBP17.6■□□□□ 0.41
RTN1-201ENST00000267484 KCNN4O15554 427 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 TRUB2O95900 331 aaKnown RBP17.6■□□□□ 0.41
RTN1-201ENST00000267484 BACE1P56817 501 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 MRPS5P82675 430 aaKnown RBP17.6■□□□□ 0.41
RTN1-201ENST00000267484 TMEM132AQ24JP5 1023 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 FAM102AQ5T9C2 384 aaPredicted RBP17.6■□□□□ 0.41
RTN1-201ENST00000267484 TRNP1Q6NT89 227 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 CHSY1Q86X52 802 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 KRT82Q9NSB4 513 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 AFG3L2Q9Y4W6 797 aa17.6■□□□□ 0.41
RTN1-201ENST00000267484 MEI4A8MW99 385 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 TOM1L1O75674 476 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 USP1O94782 785 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 UBTFL6P0CB48 400 aaPredicted RBP17.59■□□□□ 0.41
RTN1-201ENST00000267484 GNAT1P11488 350 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 POLR2BP30876 1174 aaKnown RBP17.59■□□□□ 0.41
RTN1-201ENST00000267484 YWHAZP63104 245 aaKnown RBP17.59■□□□□ 0.41
RTN1-201ENST00000267484 KCNJ11Q14654 390 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 ZC3H12AQ5D1E8 599 aaKnown RBP17.59■□□□□ 0.41
RTN1-201ENST00000267484 NIM1KQ8IY84 436 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 ZBED3Q96IU2 234 aaPredicted RBP17.59■□□□□ 0.41
RTN1-201ENST00000267484 PLAC1Q9HBJ0 212 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 PCMTD2Q9NV79 361 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 TTLL3Q9Y4R7 772 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 NR2E3Q9Y5X4 410 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 COL11A1P12107 1806 aaPredicted RBP17.59■□□□□ 0.41
RTN1-201ENST00000267484 DCAF8L1A6NGE4 600 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 DNAJC6O75061 913 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 APRTP07741 180 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 HSPA1LP34931 641 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 SCYL2Q6P3W7 929 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 TRMT10BQ6PF06 316 aaKnown RBP17.59■□□□□ 0.41
RTN1-201ENST00000267484 TSC22D3Q99576 134 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 HNRNPCL1O60812 293 aaKnown RBP17.59■□□□□ 0.41
RTN1-201ENST00000267484 RNF8O76064 485 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 AQP5P55064 265 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 MROH9Q5TGP6 573 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 EEF1DP3Q658K8 133 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 CMASQ8NFW8 434 aaPredicted RBP17.59■□□□□ 0.41
RTN1-201ENST00000267484 TRAPPC12Q8WVT3 735 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 CDHR1Q96JP9 859 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 PPP1R16BQ96T49 567 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 ACO2Q99798 780 aaKnown RBP17.59■□□□□ 0.41
RTN1-201ENST00000267484 EBF4Q9BQW3 602 aa17.59■□□□□ 0.41
RTN1-201ENST00000267484 THTPAQ9BU02 230 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms