RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 SCNN1GP51170 649 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 PAN2Q504Q3 1202 aaKnown RBP13.23□□□□□ -0.29
PRPF6-201ENST00000266079 FAM117BQ6P1L5 589 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 TRMT10CQ7L0Y3 403 aaKnown RBP13.23□□□□□ -0.29
PRPF6-201ENST00000266079 ANKRD33Q7Z3H0 272 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 PRELID2Q8N945 189 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 FAM13CQ8NE31 585 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 LINC01599Q8WXQ3 324 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 ALG3Q92685 438 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 ART4Q93070 314 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 SNX27Q96L92 541 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 NT5C1BQ96P26 610 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 NUDCD1Q96RS6 583 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 NUB1Q9Y5A7 615 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 SCN5AQ14524 2016 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 SMIM28A0A1B0GU29 152 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 GM2AP17900 193 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 SSTR3P32745 418 aaPredicted RBP13.23□□□□□ -0.29
PRPF6-201ENST00000266079 ORC1Q13415 861 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 WDR72Q3MJ13 1102 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 WDR44Q5JSH3 913 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 AGMOQ6ZNB7 445 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 OLIG1Q8TAK6 271 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 DNAJC9Q8WXX5 260 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 CTNNBL1Q8WYA6 563 aaPredicted RBP13.23□□□□□ -0.29
PRPF6-201ENST00000266079 RPS6KC1Q96S38 1066 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 MIOSQ9NXC5 875 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 SIX4Q9UIU6 781 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 POLIQ9UNA4 740 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 GTPBP10A4D1E9 387 aaKnown RBP13.23□□□□□ -0.29
PRPF6-201ENST00000266079 FOXN3O00409 490 aaPredicted RBP13.23□□□□□ -0.29
PRPF6-201ENST00000266079 CLTBP09497 229 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 WEE2P0C1S8 567 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 ACRP10323 421 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 RAP1GAPP47736 663 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 NOP14P78316 857 aaKnown RBP13.23□□□□□ -0.29
PRPF6-201ENST00000266079 SOX4Q06945 474 aaPredicted RBP13.23□□□□□ -0.29
PRPF6-201ENST00000266079 LAMB3Q13751 1172 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 MPP2Q14168 576 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 PCBP1Q15365 356 aaKnown RBP eCLIP13.23□□□□□ -0.29
PRPF6-201ENST00000266079 FAM26DQ5JW98 314 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 TTC27Q6P3X3 843 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 VSIG1Q86XK7 387 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 INPP5DQ92835 1189 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 MAGEB18Q96M61 343 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 KREMEN1Q96MU8 473 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 TMEM237Q96Q45 408 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 MYLK2Q9H1R3 596 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 C1orf112Q9NSG2 853 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 DPP3Q9NY33 737 aa13.23□□□□□ -0.29
PRPF6-201ENST00000266079 IL18RAPO95256 599 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 KRT5P13647 590 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 ATF7P17544 494 aaPredicted RBP13.22□□□□□ -0.29
PRPF6-201ENST00000266079 STX2P32856 288 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 PTDSS1P48651 473 aaKnown RBP13.22□□□□□ -0.29
PRPF6-201ENST00000266079 GATMP50440 423 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 WASHC2DQ5SRD0 308 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 AADACL2Q6P093 401 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 C15orf39Q6ZRI6 1047 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 CCDC25Q86WR0 208 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 IMPG2Q9BZV3 1241 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 VCXQ9H320 206 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 TRIM43BA6NCK2 446 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 CASTOR2A6NHX0 329 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 RNF8O76064 485 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 BRAFP15056 766 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 CSF2RAP15509 400 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 SYN1P17600 705 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 ABCB4P21439 1286 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 CTNNA2P26232 953 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 STAT1P42224 750 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 CDH8P55286 799 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 CLDN10P78369 228 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 RNASELQ05823 741 aaKnown RBP13.22□□□□□ -0.29
PRPF6-201ENST00000266079 ZNF699Q32M78 642 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 CCDC137Q6PK04 289 aaKnown RBP13.22□□□□□ -0.29
PRPF6-201ENST00000266079 GLYCTKQ8IVS8 523 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 HASPINQ8TF76 798 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 TRIM43Q96BQ3 446 aaPredicted RBP13.22□□□□□ -0.29
PRPF6-201ENST00000266079 PAAF1Q9BRP4 392 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 DDX23Q9BUQ8 820 aaKnown RBP13.22□□□□□ -0.29
PRPF6-201ENST00000266079 TRIM4Q9C037 500 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 CDC42EP4Q9H3Q1 356 aaKnown RBP13.22□□□□□ -0.29
PRPF6-201ENST00000266079 ASB7Q9H672 318 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 DLGAP2Q9P1A6 1054 aa13.22□□□□□ -0.29
PRPF6-201ENST00000266079 ARL5CA6NH57 179 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 PTGESO14684 152 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 RPLP2P05387 115 aaKnown RBP13.21□□□□□ -0.29
PRPF6-201ENST00000266079 RAG1P15918 1043 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 SETDB1Q15047 1291 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 TBC1D25Q3MII6 688 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 IRGCQ6NXR0 463 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 HELQQ8TDG4 1101 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 SEPT11Q9NVA2 429 aaKnown RBP13.21□□□□□ -0.29
PRPF6-201ENST00000266079 A0A0U1RQF3 1178 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 GTF2H1P32780 548 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 SURF1Q15526 300 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 ZDHHC14Q8IZN3 488 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 RBBP8NLQ8NC74 664 aaPredicted RBP13.21□□□□□ -0.29
PRPF6-201ENST00000266079 EZH1Q92800 747 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms