RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 MRPL4Q9BYD3 311 aaKnown RBP17.74■□□□□ 0.43
SRF-201ENST00000265354 ADAM7Q9H2U9 754 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 PAK5Q9P286 719 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 SLC39A10Q9ULF5 831 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 USP18Q9UMW8 372 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 PLA2G4CQ9UP65 541 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 RPS6KL1Q9Y6S9 549 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 LTN1O94822 1766 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 AKAP10O43572 662 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 TCF4P15884 667 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 TFE3P19532 575 aaPredicted RBP17.74■□□□□ 0.43
SRF-201ENST00000265354 MRPS22P82650 360 aaKnown RBP17.74■□□□□ 0.43
SRF-201ENST00000265354 UGCGQ16739 394 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 DIS3LQ8TF46 1054 aaKnown RBP17.74■□□□□ 0.43
SRF-201ENST00000265354 ZNF669Q96BR6 464 aaPredicted RBP17.74■□□□□ 0.43
SRF-201ENST00000265354 KLHL4Q9C0H6 718 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 RSAD1Q9HA92 442 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 GALNT8Q9NY28 637 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 USP12O75317 370 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 CYP3A4P08684 503 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 ANPEPP15144 967 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 AVPR1AP37288 418 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 NRF1Q16656 503 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 XKR3Q5GH77 459 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 N4BP2L1Q5TBK1 243 aaPredicted RBP17.74■□□□□ 0.43
SRF-201ENST00000265354 SIK2Q9H0K1 926 aa17.74■□□□□ 0.43
SRF-201ENST00000265354 UPF3AQ9H1J1 476 aaKnown RBP17.74■□□□□ 0.43
SRF-201ENST00000265354 CYP3A7-CYP3A51PA0A087WV96 503 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 DCAF8L1A6NGE4 600 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 CFHP08603 1231 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 CYP3A7P24462 503 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 NME5P56597 212 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 CYLC2Q14093 348 aaPredicted RBP17.73■□□□□ 0.43
SRF-201ENST00000265354 BMT2Q1RMZ1 405 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 PARP6Q2NL67 630 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 OR5B17Q8NGF7 314 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 SLITRK1Q96PX8 696 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 HERC5Q9UII4 1024 aaKnown RBP17.73■□□□□ 0.43
SRF-201ENST00000265354 PRKCBP05771 671 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 STXBP2Q15833 593 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 ZDHHC14Q8IZN3 488 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 SH3TC2Q8TF17 1288 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 TSR3Q9UJK0 312 aaKnown RBP17.73■□□□□ 0.43
SRF-201ENST00000265354 KPNA7A9QM74 516 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 ASMTLO95671 621 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 STAT5BP51692 787 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 OASLQ15646 514 aaKnown RBP17.73■□□□□ 0.43
SRF-201ENST00000265354 WDR60Q8WVS4 1066 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 PPP2R3CQ969Q6 453 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 APOPT1Q96IL0 206 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 NR1H4Q96RI1 486 aaPredicted RBP17.73■□□□□ 0.43
SRF-201ENST00000265354 MRPL1Q9BYD6 325 aaKnown RBP17.73■□□□□ 0.43
SRF-201ENST00000265354 CCDC90BQ9GZT6 254 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 SEMA6AQ9H2E6 1030 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 UBP1Q9NZI7 540 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 SNX13Q9Y5W8 968 aa17.73■□□□□ 0.43
SRF-201ENST00000265354 COL1A1P02452 1464 aaPredicted RBP17.73■□□□□ 0.43
SRF-201ENST00000265354 A0A0B4J269 797 aa17.72■□□□□ 0.43
SRF-201ENST00000265354 C15orf59Q2T9L4 293 aaPredicted RBP17.72■□□□□ 0.43
SRF-201ENST00000265354 STRIP1Q5VSL9 837 aa17.72■□□□□ 0.43
SRF-201ENST00000265354 MAB21L3Q8N8X9 362 aa17.72■□□□□ 0.43
SRF-201ENST00000265354 STK32BQ9NY57 414 aa17.72■□□□□ 0.43
SRF-201ENST00000265354 IL1RAPL1Q9NZN1 696 aa17.72■□□□□ 0.43
SRF-201ENST00000265354 LSM1O15116 133 aaKnown RBP17.72■□□□□ 0.43
SRF-201ENST00000265354 RBL1P28749 1068 aa17.72■□□□□ 0.43
SRF-201ENST00000265354 ASAP3Q8TDY4 903 aa17.72■□□□□ 0.43
SRF-201ENST00000265354 GMCL1Q96IK5 515 aa17.72■□□□□ 0.43
SRF-201ENST00000265354 MRGBPQ9NV56 204 aa17.72■□□□□ 0.43
SRF-201ENST00000265354 ITGB3P05106 788 aa17.72■□□□□ 0.43
SRF-201ENST00000265354 STIP1P31948 543 aaKnown RBP17.72■□□□□ 0.43
SRF-201ENST00000265354 R3HDM1Q15032 1099 aaKnown RBP17.72■□□□□ 0.43
SRF-201ENST00000265354 SIX5Q8N196 739 aa17.72■□□□□ 0.43
SRF-201ENST00000265354 NUP93Q8N1F7 819 aa17.72■□□□□ 0.43
SRF-201ENST00000265354 NDNQ99608 321 aa17.72■□□□□ 0.43
SRF-201ENST00000265354 COPS7BQ9H9Q2 264 aaPredicted RBP17.72■□□□□ 0.43
SRF-201ENST00000265354 FMN2Q9NZ56 1722 aa17.72■□□□□ 0.43
SRF-201ENST00000265354 TCRBV9S1A1TA0A576 114 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 FGFR3P22607 806 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 MIPP30301 263 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 GCNT1Q02742 428 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 DPYSL3Q14195 570 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 KATNAL2Q8IYT4 538 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 RXFP2Q8WXD0 754 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 FAM163AQ96GL9 167 aaPredicted RBP17.71■□□□□ 0.43
SRF-201ENST00000265354 MARK4Q96L34 752 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 WRNIP1Q96S55 665 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 DRC3Q9H069 523 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 HNRNPRO43390 633 aaKnown RBP17.71■□□□□ 0.43
SRF-201ENST00000265354 SLC26A4O43511 780 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 FSTL1Q12841 308 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 TNFAIP1Q13829 316 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 FNBP1LQ5T0N5 605 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 ULK2Q8IYT8 1036 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 FAM136AQ96C01 138 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 SNX25Q9H3E2 840 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 AGO4Q9HCK5 861 aaKnown RBP17.71■□□□□ 0.43
SRF-201ENST00000265354 POLIQ9UNA4 740 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 A8MXQ7 604 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 CCNFP41002 786 aa17.71■□□□□ 0.43
SRF-201ENST00000265354 SKIV2L2P42285 1042 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms