RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 NSUN6Q8TEA1 469 aaKnown RBP5.63□□□□□ -1.51
XRN1-201ENST00000264951 STK32AQ8WU08 396 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 RNF25Q96BH1 459 aaPredicted RBP5.63□□□□□ -1.51
XRN1-201ENST00000264951 RAB6BQ9NRW1 208 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 RRN3Q9NYV6 651 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 RARBP10826 455 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 ME2P23368 584 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 RPS7P62081 194 aaKnown RBP5.63□□□□□ -1.51
XRN1-201ENST00000264951 LRRC14Q15048 493 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 FIGNQ5HY92 759 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 ARMC6Q6NXE6 501 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 SLC26A11Q86WA9 606 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 NT5DC4Q86YG4 428 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 DCPSQ96C86 337 aaKnown RBP5.63□□□□□ -1.51
XRN1-201ENST00000264951 HEMGNQ9BXL5 484 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 PNPLA3Q9NST1 481 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 RPS6KA6Q9UK32 745 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 ATP7BP35670 1465 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 A0A0G2JPF8 293 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 HNRNPCL3B7ZW38 293 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 G3V2T6 193 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 SNAP23O00161 211 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 ATG7O95352 703 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 HNRNPCL4P0DMR1 293 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 SRGNP10124 158 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 ATP1A3P13637 1013 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 CCR3P51677 355 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 VBP1P61758 197 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 AP1S1P61966 158 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 MDH1BQ5I0G3 518 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 DHFR2Q86XF0 187 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 GJD3Q8N144 294 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 SNX31Q8N9S9 440 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 GTF3C2Q8WUA4 911 aaPredicted RBP5.63□□□□□ -1.51
XRN1-201ENST00000264951 PCMTD2Q9NV79 361 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 THAP1Q9NVV9 213 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 ZNF804BA4D1E1 1349 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 GOLGA4Q13439 2230 aaKnown RBP5.63□□□□□ -1.51
XRN1-201ENST00000264951 DGAT1O75907 488 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 CYP21A2P08686 494 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 PAX3P23760 479 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 GNL1P36915 607 aaPredicted RBP5.63□□□□□ -1.51
XRN1-201ENST00000264951 EIF2S3P41091 472 aaKnown RBP5.63□□□□□ -1.51
XRN1-201ENST00000264951 DNAJB7Q7Z6W7 309 aaPredicted RBP5.63□□□□□ -1.51
XRN1-201ENST00000264951 KLHL23Q8NBE8 558 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 ANKS1AQ92625 1134 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 UBE2E3Q969T4 207 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 HBS1LQ9Y450 684 aaKnown RBP5.63□□□□□ -1.51
XRN1-201ENST00000264951 ARHGEF33A8MVX0 844 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 H3BQF6 201 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 ATP6V1C1P21283 382 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 FGFR4P22455 802 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 AKR1D1P51857 326 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 RHAGQ02094 409 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 PTH1RQ03431 593 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 FAM189A2Q15884 450 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 MARK2Q7KZI7 788 aaKnown RBP5.63□□□□□ -1.51
XRN1-201ENST00000264951 POLNQ7Z5Q5 900 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 C8orf59Q8N0T1 100 aaPredicted RBP5.63□□□□□ -1.51
XRN1-201ENST00000264951 TRPV3Q8NET8 790 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 JARID2Q92833 1246 aaPredicted RBP5.63□□□□□ -1.51
XRN1-201ENST00000264951 EHD1Q9H4M9 534 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 SPASTQ9UBP0 616 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 DUSP12Q9UNI6 340 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 DMTF1Q9Y222 760 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 R3HDM2Q9Y2K5 976 aaKnown RBP5.63□□□□□ -1.51
XRN1-201ENST00000264951 PSMD11O00231 422 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 SERPINA1P01009 418 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 ITGB6P18564 788 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 PSMB9P28065 219 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 SLC16A1P53985 500 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 GEMP55040 296 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 BTN3A2P78410 334 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 AKAP14Q86UN6 197 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 CD302Q8IX05 232 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 NLGN1Q8N2Q7 840 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 ZNF557Q8N988 423 aaPredicted RBP5.63□□□□□ -1.51
XRN1-201ENST00000264951 SPATA18Q8TC71 538 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 CDK5RAP1Q96SZ6 601 aaKnown RBP5.63□□□□□ -1.51
XRN1-201ENST00000264951 PHTF1Q9UMS5 762 aa5.63□□□□□ -1.51
XRN1-201ENST00000264951 MAP3K19Q56UN5 1328 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 KIF21AQ7Z4S6 1674 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 A0A0A6YYK5 440 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 PIGBOS1A0A0B4J2F0 54 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 TSC22D2O75157 780 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 IL13P35225 146 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 ADD2P35612 726 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 ACTR3P61158 418 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 FRG1Q14331 258 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 CHI3L2Q15782 390 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 SLC45A4Q5BKX6 768 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 USPL1Q5W0Q7 1092 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 PYHIN1Q6K0P9 492 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 SHQ1Q6PI26 577 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 TDRD5Q8NAT2 981 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 PNPT1Q8TCS8 783 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 FAM120BQ96EK7 910 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 ZCWPW1Q9H0M4 648 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 MTIF3Q9H2K0 278 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 ESYT3A0FGR9 886 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms