RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 FEZF2Q8TBJ5 459 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 SPPL2BQ8TCT7 592 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 KCTD13Q8WZ19 329 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 TRIM11Q96F44 468 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 FUBP3Q96I24 572 aaKnown RBP eCLIP10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 HSFY1Q96LI6 401 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 MCEEQ96PE7 176 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 OXCT2Q9BYC2 517 aaPredicted RBP10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 PRO3102Q9H379 93 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 SLC28A3Q9HAS3 691 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 CYP4F11Q9HBI6 524 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 LRRC4Q9HBW1 653 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 FNIP2Q9P278 1114 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 ANAPC7Q9UJX3 599 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 STRIP2Q9ULQ0 834 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 DOCK6Q96HP0 2047 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 MYO16Q9Y6X6 1858 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 GOLGA6L9A6NEM1 432 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 TMEM191CA6NGB0 347 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 SIGLEC16A6NMB1 481 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 FSCN2O14926 492 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 PER2O15055 1255 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 TGM5O43548 720 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 NCK2O43639 380 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 KIF5CO60282 957 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 FTCDO95954 541 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 KRT3P12035 628 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 ATF2P15336 505 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 ATF6P18850 670 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 KLRC2P26717 231 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 MAGEA11P43364 429 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 ACADSBP45954 432 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 SLC5A3P53794 718 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 SMC1AQ14683 1233 aaKnown RBP10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 RAB6CQ53S08 254 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 PPP1R2P3Q6NXS1 205 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 VSTM1Q6UX27 236 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 SYT10Q6XYQ8 523 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 RBM23Q86U06 439 aaKnown RBP10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 RHOT2Q8IXI1 618 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 SIX6OS1Q8N1H7 587 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 TXLNBQ8N3L3 684 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 MSANTD4Q8NCY6 345 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 MARVELD3Q96A59 401 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 C8orf48Q96LL4 319 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 SELENOOQ9BVL4 669 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 RAB6CQ9H0N0 254 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 ABCB6Q9NP58 842 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 RRAGDQ9NQL2 400 aaPredicted RBP10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 PARVAQ9NVD7 372 aa10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 AFF4Q9UHB7 1163 aaKnown RBP10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 PACSIN2Q9UNF0 486 aaPredicted RBP10.23□□□□□ -0.77
SNRNP40-201ENST00000263694 YJEFN3A6XGL0 299 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 E7ENQ6 273 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 ENC1O14682 589 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 ZBED1O96006 694 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 TNNT1P13805 278 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 TFE3P19532 575 aaPredicted RBP10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 FLT3P36888 993 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 DAOAP59103 153 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 MRPS5P82675 430 aaKnown RBP10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 MLLT1Q03111 559 aaPredicted RBP10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 UBE3AQ05086 875 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 ZNF252P-AS1Q0IIN9 211 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 TCEAL1Q15170 157 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 SH3PXD2AQ5TCZ1 1133 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 TPGS2Q68CL5 300 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 DCUN1D2Q6PH85 259 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 ADGRD2Q7Z7M1 963 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 DAAM2Q86T65 1068 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 RNF10Q8N5U6 811 aaKnown RBP10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 LRRC57Q8N9N7 239 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 ZNF592Q92610 1267 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 TIFAQ96CG3 184 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 SAMD11Q96NU1 681 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 UBXN6Q9BZV1 441 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 WDR35Q9P2L0 1181 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 UVRAGQ9P2Y5 699 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 STK39Q9UEW8 545 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 DNAI1Q9UI46 699 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 TMEM59LQ9UK28 342 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 MAGED2Q9UNF1 606 aaPredicted RBP10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 CDH23Q9H251 3354 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 MTCL1Q9Y4B5 1905 aaKnown RBP10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 SLC38A8A6NNN8 435 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 PRRG1O14668 218 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 TRIM66O15016 1216 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 MTA2O94776 668 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 TCF4P15884 667 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 ELF1P32519 619 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 DNA2P51530 1060 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 GSCP56915 257 aaPredicted RBP10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 ETF1P62495 437 aaKnown RBP10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 RBM10P98175 930 aaKnown RBP10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 SMARCB1Q12824 385 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 C15orf59Q2T9L4 293 aaPredicted RBP10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 LILRA6Q6PI73 481 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 BHLHA9Q7RTU4 235 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 GPR65Q8IYL9 337 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms