RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 TACC1O75410 805 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 FAM163BP0C2L3 166 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 ITPKAP23677 461 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 STAT6P42226 847 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 TNNC1P63316 161 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 SIM1P81133 766 aaPredicted RBP9.53□□□□□ -0.88
LCN1-201ENST00000263598 RPL6Q02878 288 aaKnown RBP9.53□□□□□ -0.88
LCN1-201ENST00000263598 IFRD2Q12894 506 aaPredicted RBP9.53□□□□□ -0.88
LCN1-201ENST00000263598 SEMA3BQ13214 749 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 HNRNPDQ14103 355 aaKnown RBP9.53□□□□□ -0.88
LCN1-201ENST00000263598 LY6G5CQ5SRR4 150 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 PEAR1Q5VY43 1037 aaPredicted RBP9.53□□□□□ -0.88
LCN1-201ENST00000263598 PIP4P1Q86T03 277 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 C12orf40Q86WS4 652 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 SFTPA1Q8IWL2 248 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 CCDC65Q8IXS2 484 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 FRMD1Q8N878 549 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 OR6B3Q8NGW1 331 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 OVCA2Q8WZ82 227 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 FBXO2Q9UK22 296 aaPredicted RBP9.53□□□□□ -0.88
LCN1-201ENST00000263598 SH3BP1Q9Y3L3 701 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 SRPRBQ9Y5M8 271 aaKnown RBP9.53□□□□□ -0.88
LCN1-201ENST00000263598 CLIC4Q9Y696 253 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 WDFY3Q8IZQ1 3526 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 MYO16Q9Y6X6 1858 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 PTPRJQ12913 1337 aa9.53□□□□□ -0.88
LCN1-201ENST00000263598 SPAARA0A1B0GVQ0 90 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 VPS37CA5D8V6 355 aaPredicted RBP9.52□□□□□ -0.89
LCN1-201ENST00000263598 HOXC11O43248 304 aaPredicted RBP9.52□□□□□ -0.89
LCN1-201ENST00000263598 RTN3O95197 1032 aaPredicted RBP9.52□□□□□ -0.89
LCN1-201ENST00000263598 SYPP08247 313 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 SERPINF2P08697 491 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 PTPN1P18031 435 aaKnown RBP9.52□□□□□ -0.89
LCN1-201ENST00000263598 TNNI1P19237 187 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 YWHAQP27348 245 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 MESP2Q0VG99 397 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 ACAP1Q15027 740 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 HECTD3Q5T447 861 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 SDE2Q6IQ49 451 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 LRSAM1Q6UWE0 723 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 TRAPPC11Q7Z392 1133 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 CBWD2Q8IUF1 395 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 NUP93Q8N1F7 819 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 ZNF513Q8N8E2 541 aaPredicted RBP9.52□□□□□ -0.89
LCN1-201ENST00000263598 NAT16Q8N8M0 369 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 FBXO32Q969P5 355 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 CLIC6Q96NY7 704 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 MRPL45Q9BRJ2 306 aaKnown RBP9.52□□□□□ -0.89
LCN1-201ENST00000263598 FGFBP2Q9BYJ0 223 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 LRRC27Q9C0I9 530 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 NACA2Q9H009 215 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 ZDHHC4Q9NPG8 344 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 HSPBP1Q9NZL4 362 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 DEC1Q9P2X7 70 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 KLK13Q9UKR3 277 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 LHX6Q9UPM6 363 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 ATP8B3O60423 1300 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 THADAQ6YHU6 1953 aa9.52□□□□□ -0.89
LCN1-201ENST00000263598 NUP205Q92621 2012 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 HELZP42694 1942 aaKnown RBP9.51□□□□□ -0.89
LCN1-201ENST00000263598 A8MXQ7 604 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 COCHO43405 550 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 ZNF217O75362 1048 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 TULP3O75386 442 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 CD2BP2O95400 341 aaKnown RBP9.51□□□□□ -0.89
LCN1-201ENST00000263598 CST3P01034 146 aaPredicted RBP9.51□□□□□ -0.89
LCN1-201ENST00000263598 DLATP10515 647 aaKnown RBP9.51□□□□□ -0.89
LCN1-201ENST00000263598 CHRM1P11229 460 aaPredicted RBP9.51□□□□□ -0.89
LCN1-201ENST00000263598 HOXB2P14652 356 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 GABRG2P18507 467 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 PDCP20941 246 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 NTSR1P30989 418 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 TUBP50607 506 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 CACNA2D1P54289 1103 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 RING1Q06587 406 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 ZNF33AQ06730 810 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 TRPC3Q13507 836 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 SNRNP35Q16560 246 aaKnown RBP9.51□□□□□ -0.89
LCN1-201ENST00000263598 ZNF423Q2M1K9 1284 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 ANO4Q32M45 955 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 WDR72Q3MJ13 1102 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 C8orf34Q49A92 452 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 C10orf76Q5T2E6 689 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 ETFBKMTQ8IXQ9 262 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 PHTF2Q8N3S3 785 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 MINDY1Q8N5J2 469 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 DEFB119Q8N690 84 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 TERB1Q8NA31 727 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 B3GALNT2Q8NCR0 500 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 DUSP9Q99956 384 aaKnown RBP9.51□□□□□ -0.89
LCN1-201ENST00000263598 ZNF518BQ9C0D4 1074 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 DPEP3Q9H4B8 488 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 UPF2Q9HAU5 1272 aaKnown RBP9.51□□□□□ -0.89
LCN1-201ENST00000263598 CAPN10Q9HC96 672 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 FSCN3Q9NQT6 498 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 SPHK2Q9NRA0 654 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 CALCOCO1Q9P1Z2 691 aa9.51□□□□□ -0.89
LCN1-201ENST00000263598 ANAPC1Q9H1A4 1944 aa9.5□□□□□ -0.89
LCN1-201ENST00000263598 ABCA7Q8IZY2 2146 aa9.5□□□□□ -0.89
LCN1-201ENST00000263598 CEP295Q9C0D2 2601 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms