RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 AMPD1P23109 780 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 RBL1P28749 1068 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 RASSF2P50749 326 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 MXRA7P84157 204 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 THOC5Q13769 683 aaKnown RBP9.52□□□□□ -0.89
MSH4-201ENST00000263187 CTC1Q2NKJ3 1217 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 ACSBG2Q5FVE4 666 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 FKBP1CQ5VVH2 108 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 ANO7Q6IWH7 933 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 C16orf46Q6P387 395 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 TRMT10BQ6PF06 316 aaKnown RBP9.52□□□□□ -0.89
MSH4-201ENST00000263187 XYLT1Q86Y38 959 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 MPP5Q8N3R9 675 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 ZNF276Q8N554 614 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 PDCD7Q8N8D1 485 aaKnown RBP9.52□□□□□ -0.89
MSH4-201ENST00000263187 HIPK4Q8NE63 616 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 FAM161BQ96MY7 647 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 RILPQ96NA2 401 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 ACO2Q99798 780 aaKnown RBP9.52□□□□□ -0.89
MSH4-201ENST00000263187 ELOVL4Q9GZR5 314 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 XYLT2Q9H1B5 865 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 NRBP2Q9NSY0 501 aa9.52□□□□□ -0.89
MSH4-201ENST00000263187 SPDYE16A6NNV3 312 aaPredicted RBP9.51□□□□□ -0.89
MSH4-201ENST00000263187 NOP56O00567 594 aaKnown RBP9.51□□□□□ -0.89
MSH4-201ENST00000263187 MAFGO15525 162 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 HCRTO43612 131 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 MICAL2O94851 1124 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 BAG2O95816 211 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 HMGCRP04035 888 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 HOXC6P09630 235 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 TFE3P19532 575 aaPredicted RBP9.51□□□□□ -0.89
MSH4-201ENST00000263187 RTP1P59025 263 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 CCDC15Q0P6D6 951 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 TNFAIP1Q13829 316 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 CA9Q16790 459 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 ZNF667Q5HYK9 610 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 CES4AQ5XG92 561 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 TRNP1Q6NT89 227 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 CASC4Q6P4E1 433 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 TDRPQ86YL5 185 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 WDR49Q8IV35 697 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 SCUBE3Q8IX30 993 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 RXFP2Q8WXD0 754 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 SRPK1Q96SB4 655 aaKnown RBP9.51□□□□□ -0.89
MSH4-201ENST00000263187 B3GNT5Q9BYG0 378 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 KCNK13Q9HB14 408 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.51□□□□□ -0.89
MSH4-201ENST00000263187 SIGLEC16A6NMB1 481 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 B2RBV5 119 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 C2CD2LO14523 706 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 FCHO1O14526 889 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 OGTO15294 1046 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 GSC2O15499 205 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 SMNDC1O75940 238 aaKnown RBP eCLIP9.51□□□□□ -0.89
MSH4-201ENST00000263187 FARP2O94887 1054 aaPredicted RBP9.51□□□□□ -0.89
MSH4-201ENST00000263187 KRT7P08729 469 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 SERPINB4P48594 390 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 SLC8A3P57103 927 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 YWHAEP62258 255 aaKnown RBP9.51□□□□□ -0.89
MSH4-201ENST00000263187 CHI3L2Q15782 390 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 KLHL38Q2WGJ6 581 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 SLC45A4Q5BKX6 768 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 THEMIS2Q5TEJ8 643 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 MAP1SQ66K74 1059 aaPredicted RBP9.51□□□□□ -0.89
MSH4-201ENST00000263187 TMEM154Q6P9G4 183 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 C4orf50Q6ZRC1 276 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 BBS12Q6ZW61 710 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 MAB21L3Q8N8X9 362 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 MZB1Q8WU39 189 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 NRG4Q8WWG1 115 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 DNAJC9Q8WXX5 260 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 ATXN7L3BQ96GX2 97 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 ANKRD36BP1Q96IX9 119 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 CDHR1Q96JP9 859 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 CXCL16Q9H2A7 254 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 CYLDQ9NQC7 956 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 NMRK1Q9NWW6 199 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 TAS2R1Q9NYW7 299 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 SENP1Q9P0U3 644 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 DLGAP2Q9P1A6 1054 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 ZC3H7BQ9UGR2 993 aaKnown RBP9.51□□□□□ -0.89
MSH4-201ENST00000263187 FAM189A1O60320 539 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 POLR2BP30876 1174 aaKnown RBP9.51□□□□□ -0.89
MSH4-201ENST00000263187 SKIV2L2P42285 1042 aaKnown RBP9.51□□□□□ -0.89
MSH4-201ENST00000263187 PEX6Q13608 980 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 UBAP2LQ14157 1087 aaKnown RBP9.51□□□□□ -0.89
MSH4-201ENST00000263187 RASA2Q15283 850 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 ATF7IP2Q5U623 682 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 SNX30Q5VWJ9 437 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 JADE1Q6IE81 842 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 C7orf31Q8N865 590 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 C1orf127Q8N9H9 656 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 AGR3Q8TD06 166 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 USP6NLQ92738 828 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 NSL1Q96IY1 281 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 TTC1Q99614 292 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 SYT15Q9BQS2 421 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 C20orf27Q9GZN8 174 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 PIDD1Q9HB75 910 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 SMYD2Q9NRG4 433 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms