RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 OR6B2Q6IFH4 312 aa28.91■■■□□ 2.22
SMARCD3-201ENST00000262188 VSTM1Q6UX27 236 aa28.91■■■□□ 2.22
SMARCD3-201ENST00000262188 TMEM110Q86TL2 294 aa28.91■■■□□ 2.22
SMARCD3-201ENST00000262188 ZBTB9Q96C00 473 aa28.91■■■□□ 2.22
SMARCD3-201ENST00000262188 IRX2Q9BZI1 471 aaPredicted RBP28.91■■■□□ 2.22
SMARCD3-201ENST00000262188 TRIM7Q9C029 511 aa28.91■■■□□ 2.22
SMARCD3-201ENST00000262188 GUCA1BQ9UMX6 200 aa28.91■■■□□ 2.22
SMARCD3-201ENST00000262188 COG5Q9UP83 839 aa28.91■■■□□ 2.22
SMARCD3-201ENST00000262188 MACROD2A1Z1Q3 448 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 PRRG1O14668 218 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 BUB1O43683 1085 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 GRAP2O75791 330 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 MAGEA11P43364 429 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 USP46P62068 366 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 GPC5P78333 572 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 STK32AQ8WU08 396 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 LRRC4Q9HBW1 653 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 TUBB4AP04350 444 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 GABRB2P47870 512 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 SLC5A3P53794 718 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 SMARCB1Q12824 385 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 ZSCAN26Q16670 478 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 LILRA6Q6PI73 481 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 HOMEZQ8IX15 550 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 C2orf15Q8WU43 125 aaKnown RBP28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 ULBP1Q9BZM6 244 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 TTYH1Q9H313 450 aaPredicted RBP28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 MED4Q9NPJ6 270 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 YIPF1Q9Y548 306 aa28.9■■■□□ 2.22
SMARCD3-201ENST00000262188 TNFRSF10BO14763 440 aa28.89■■■□□ 2.22
SMARCD3-201ENST00000262188 CLASP2O75122 1294 aaKnown RBP28.89■■■□□ 2.22
SMARCD3-201ENST00000262188 USP17L7P0C7H9 530 aa28.89■■■□□ 2.22
SMARCD3-201ENST00000262188 EPCAMP16422 314 aa28.89■■■□□ 2.22
SMARCD3-201ENST00000262188 RPL34P49207 117 aaKnown RBP28.89■■■□□ 2.22
SMARCD3-201ENST00000262188 CLCN4P51793 760 aa28.89■■■□□ 2.22
SMARCD3-201ENST00000262188 FEZF2Q8TBJ5 459 aa28.89■■■□□ 2.22
SMARCD3-201ENST00000262188 BTBD6Q96KE9 485 aa28.89■■■□□ 2.22
SMARCD3-201ENST00000262188 HSFY1Q96LI6 401 aa28.89■■■□□ 2.22
SMARCD3-201ENST00000262188 LUC7LQ9NQ29 371 aaKnown RBP28.89■■■□□ 2.22
SMARCD3-201ENST00000262188 PJA2O43164 708 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 CALB1P05937 261 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 MAGEA9P43362 315 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 GSCP56915 257 aaPredicted RBP28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 KIF5AQ12840 1032 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 TTC31Q49AM3 519 aaPredicted RBP28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 RAB41Q5JT25 222 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 SLC7A14Q8TBB6 771 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 SLC35G2Q8TBE7 412 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 KCTD13Q8WZ19 329 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 LRCH3Q96II8 777 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 C8orf48Q96LL4 319 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 PRDM12Q9H4Q4 367 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 TRIM66O15016 1216 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 CYP1A2P05177 515 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 ELF1P32519 619 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 C10orf67Q8IYJ2 551 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 NUP85Q9BW27 656 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 ARGLU1Q9NWB6 273 aaPredicted RBP28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 CTTNBP2NLQ9P2B4 639 aa28.88■■■□□ 2.21
SMARCD3-201ENST00000262188 PATJQ8NI35 1801 aa28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 TCRBV5S1A1TA0A578 114 aa28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 ZSCAN12O43309 604 aa28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 GLUD1P00367 558 aa28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 IVLP07476 585 aa28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 PGFP49763 221 aa28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 RNASE9P60153 205 aaKnown RBP28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 RPL7AP62424 266 aaKnown RBP28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 TWF1Q12792 350 aa28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 MAMLD1Q13495 774 aa28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 FAM102AQ5T9C2 384 aaPredicted RBP28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 LIN9Q5TKA1 542 aa28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 OLFML1Q6UWY5 402 aa28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 SIX6OS1Q8N1H7 587 aa28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 KREMEN2Q8NCW0 462 aa28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 VCPIP1Q96JH7 1222 aa28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 FAM161BQ96MY7 647 aa28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 METTL5Q9NRN9 209 aaKnown RBP28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 INTUQ9ULD6 942 aa28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 INSL5Q9Y5Q6 135 aa28.87■■■□□ 2.21
SMARCD3-201ENST00000262188 NRIP1P48552 1158 aa28.86■■■□□ 2.21
SMARCD3-201ENST00000262188 ARHGAP29Q52LW3 1261 aa28.86■■■□□ 2.21
SMARCD3-201ENST00000262188 EMC1Q8N766 993 aa28.86■■■□□ 2.21
SMARCD3-201ENST00000262188 MSANTD4Q8NCY6 345 aa28.86■■■□□ 2.21
SMARCD3-201ENST00000262188 JOSD2Q8TAC2 188 aa28.86■■■□□ 2.21
SMARCD3-201ENST00000262188 UBXN6Q9BZV1 441 aa28.86■■■□□ 2.21
SMARCD3-201ENST00000262188 FBXW11Q9UKB1 542 aa28.86■■■□□ 2.21
SMARCD3-201ENST00000262188 MAGED2Q9UNF1 606 aaPredicted RBP28.86■■■□□ 2.21
SMARCD3-201ENST00000262188 MOCS3O95396 460 aa28.86■■■□□ 2.21
SMARCD3-201ENST00000262188 DNAJC24Q6P3W2 148 aa28.86■■■□□ 2.21
SMARCD3-201ENST00000262188 HFE2Q6ZVN8 426 aa28.86■■■□□ 2.21
SMARCD3-201ENST00000262188 TCEAL8Q8IYN2 117 aa28.86■■■□□ 2.21
SMARCD3-201ENST00000262188 MCRS1Q96EZ8 462 aa28.86■■■□□ 2.21
SMARCD3-201ENST00000262188 GOLPH3Q9H4A6 298 aa28.86■■■□□ 2.21
SMARCD3-201ENST00000262188 NCANO14594 1321 aa28.86■■■□□ 2.21
SMARCD3-201ENST00000262188 A0A1W2PPC1 479 aa28.85■■■□□ 2.21
SMARCD3-201ENST00000262188 ACADSBP45954 432 aa28.85■■■□□ 2.21
SMARCD3-201ENST00000262188 TUFMP49411 452 aaKnown RBP28.85■■■□□ 2.21
SMARCD3-201ENST00000262188 NAA30Q147X3 362 aaPredicted RBP28.85■■■□□ 2.21
SMARCD3-201ENST00000262188 GRIN2CQ14957 1233 aa28.85■■■□□ 2.21
SMARCD3-201ENST00000262188 PLEKHA7Q6IQ23 1121 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms