RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ACAP1Q15027 740 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 GPD1LQ8N335 351 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 PSMB7Q99436 277 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 C17orf80Q9BSJ5 609 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 PLA2G2FQ9BZM2 168 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 UGT1A7Q9HAW7 530 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 UGT1A10Q9HAW8 530 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 UGT1A8Q9HAW9 530 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 LZTFL1Q9NQ48 299 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 KLHL11Q9NVR0 708 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 C2CD2Q9Y426 696 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 PRAMEF4O60810 478 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 MAP3K6O95382 1288 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 DESP17661 470 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 POLR2BP30876 1174 aaKnown RBP5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 EMC10Q5UCC4 262 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 SNX30Q5VWJ9 437 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 PRAMEF9Q5VWM5 478 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 SLC8B1Q6J4K2 584 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 NOC3LQ8WTT2 800 aaKnown RBP5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 FCRL2Q96LA5 508 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 LSM14BQ9BX40 385 aaKnown RBP5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 HOXD9P28356 352 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 ALFQ53S48 1182 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 GNASQ5JWF2 1037 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 NCBP2-AS2Q69YL0 99 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 UNC45BQ8IWX7 931 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 IGSF8Q969P0 613 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 A6NNZ2 444 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 CYP2F1P24903 491 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 NUMBP49757 651 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 INHBEP58166 350 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 SLC7A5Q01650 507 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 DSG1Q02413 1049 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 PDCLQ13371 301 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 NCOA4Q13772 614 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 ZNF789Q5FWF6 425 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 TSTD2Q5T7W7 516 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 SYCE2Q6PIF2 218 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 PRSS55Q6UWB4 352 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 TRIM67Q6ZTA4 783 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 KIAA0907Q7Z7F0 614 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 THNSL1Q8IYQ7 743 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 CASP10Q92851 521 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 CXorf49A8MYA2 514 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 PITPNM1O00562 1244 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 CNTN5O94779 1100 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 POMCP01189 267 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 HNRNPA1P09651 372 aaKnown RBP eCLIP5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 COMTP21964 271 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 CLCN6P51797 869 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 DPYSL3Q14195 570 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 MFSD7Q6UXD7 560 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 RASSF8Q8NHQ8 419 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 SLCO2A1Q92959 643 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 TOX2Q96NM4 488 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 MLPHQ9BV36 600 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 FBN1P35555 2871 aaKnown RBP5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 ASCC3Q8N3C0 2202 aaKnown RBP5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 MYCP01106 439 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 AFPP02771 609 aaKnown RBP5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 C6orf222P0C671 652 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 SLC26A2P50443 739 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 TNK2Q07912 1038 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 PPFIA1Q13136 1202 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 NEDD9Q14511 834 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 DGKDQ16760 1214 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 SLC9A4Q6AI14 798 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 RSPH1Q8WYR4 309 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 PKNOX2Q96KN3 472 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 STOML2Q9UJZ1 356 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 RAD51CO43502 376 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 IPO7O95373 1038 aaKnown RBP5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 PRSS56P0CW18 603 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 EFNA3P52797 238 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 SHHQ15465 462 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 PTGISQ16647 500 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 C12orf50Q8NA57 414 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 KIFAP3Q92845 792 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 CYP2S1Q96SQ9 504 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 OSBPL9Q96SU4 736 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 AGPAT1Q99943 283 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 LRRC19Q9H756 370 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 ASB1Q9Y576 335 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 PSAT1Q9Y617 370 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 ZNF195O14628 629 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 TBX10O75333 385 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 AVILO75366 819 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 TACC1O75410 805 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 DNAJB2P25686 324 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 CCL23P55773 120 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 IRX3P78415 501 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 MTM1Q13496 603 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 FNBP1LQ5T0N5 605 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 ARHGAP17Q68EM7 881 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 PKN3Q6P5Z2 889 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 MAVSQ7Z434 540 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 OR8K1Q8NGG5 319 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 CCDC102AQ96A19 550 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 FAM131CQ96AQ9 280 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms