RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 SHC3Q92529 594 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 ELSPBP1Q96BH3 223 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 KXD1Q9BQD3 176 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 LSM14BQ9BX40 385 aaKnown RBP17.69■□□□□ 0.42
SDCBP-201ENST00000260130 TRIOO75962 3097 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 SERPINC1P01008 464 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 FCARP24071 287 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 WEE1P30291 646 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 UBASH3AP57075 661 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 ZXDAP98168 799 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 CNGA2Q16280 664 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 LCLAT1Q6UWP7 414 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 ARID3BQ8IVW6 561 aaPredicted RBP17.69■□□□□ 0.42
SDCBP-201ENST00000260130 UBALD2Q8IYN6 164 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 EDAQ92838 391 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 UBXN6Q9BZV1 441 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 FBXO44Q9H4M3 255 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 EPHX3Q9H6B9 360 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 L2HGDHQ9H9P8 463 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 PLCB1Q9NQ66 1216 aa17.69■□□□□ 0.42
SDCBP-201ENST00000260130 AJAP1Q9UKB5 411 aaPredicted RBP17.69■□□□□ 0.42
SDCBP-201ENST00000260130 FAM92AA1XBS5 289 aa17.68■□□□□ 0.42
SDCBP-201ENST00000260130 BRD2P25440 801 aaKnown RBP17.68■□□□□ 0.42
SDCBP-201ENST00000260130 USP8P40818 1118 aa17.68■□□□□ 0.42
SDCBP-201ENST00000260130 UBXN1Q04323 297 aa17.68■□□□□ 0.42
SDCBP-201ENST00000260130 STILQ15468 1287 aa17.68■□□□□ 0.42
SDCBP-201ENST00000260130 CMTM8Q8IZV2 173 aa17.68■□□□□ 0.42
SDCBP-201ENST00000260130 FBXO32Q969P5 355 aa17.68■□□□□ 0.42
SDCBP-201ENST00000260130 ZSWIM1Q9BR11 485 aa17.68■□□□□ 0.42
SDCBP-201ENST00000260130 ZNF840PA6NDX5 716 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 CALCAP01258 141 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 UCHL3P15374 230 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 VIPR2P41587 438 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 BCAT1P54687 386 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 GPRIN1Q7Z2K8 1008 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 PDZD8Q8NEN9 1154 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 UBA3Q8TBC4 463 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 OVCA2Q8WZ82 227 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 E2F7Q96AV8 911 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 PLA2G2FQ9BZM2 168 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 SMOC2Q9H3U7 446 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 CHORDC1Q9UHD1 332 aaPredicted RBP17.67■□□□□ 0.42
SDCBP-201ENST00000260130 DUSP12Q9UNI6 340 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.67■□□□□ 0.42
SDCBP-201ENST00000260130 FOXN3O00409 490 aaPredicted RBP17.67■□□□□ 0.42
SDCBP-201ENST00000260130 RFX1P22670 979 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 AVPR1AP37288 418 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 KIF11P52732 1056 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 PDE4CQ08493 712 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 BST2Q10589 180 aaKnown RBP17.67■□□□□ 0.42
SDCBP-201ENST00000260130 RAPGEF1Q13905 1077 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 PIGZQ86VD9 579 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 GPIHBP1Q8IV16 184 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 NAA15Q9BXJ9 866 aaKnown RBP17.67■□□□□ 0.42
SDCBP-201ENST00000260130 TRPC7Q9HCX4 862 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 SIK3Q9Y2K2 1263 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 FHOD1Q9Y613 1164 aa17.67■□□□□ 0.42
SDCBP-201ENST00000260130 NARSO43776 548 aaKnown RBP17.66■□□□□ 0.42
SDCBP-201ENST00000260130 ABL1P00519 1130 aa17.66■□□□□ 0.42
SDCBP-201ENST00000260130 KLK7P49862 253 aa17.66■□□□□ 0.42
SDCBP-201ENST00000260130 PKDCCQ504Y2 493 aa17.66■□□□□ 0.42
SDCBP-201ENST00000260130 MYO10Q9HD67 2058 aa17.66■□□□□ 0.42
SDCBP-201ENST00000260130 C2orf78A6NCI8 922 aa17.66■□□□□ 0.42
SDCBP-201ENST00000260130 XPO1O14980 1071 aaKnown RBP17.66■□□□□ 0.42
SDCBP-201ENST00000260130 SRFP11831 508 aa17.66■□□□□ 0.42
SDCBP-201ENST00000260130 GNA15P30679 374 aa17.66■□□□□ 0.42
SDCBP-201ENST00000260130 GABPB1Q06547 395 aaPredicted RBP17.66■□□□□ 0.42
SDCBP-201ENST00000260130 DRAP1Q14919 205 aaPredicted RBP17.66■□□□□ 0.42
SDCBP-201ENST00000260130 SYT10Q6XYQ8 523 aa17.66■□□□□ 0.42
SDCBP-201ENST00000260130 ZNF606Q8WXB4 792 aa17.66■□□□□ 0.42
SDCBP-201ENST00000260130 PCMTD1Q96MG8 357 aaPredicted RBP17.66■□□□□ 0.42
SDCBP-201ENST00000260130 ERGIC2Q96RQ1 377 aa17.66■□□□□ 0.42
SDCBP-201ENST00000260130 CYP2S1Q96SQ9 504 aa17.66■□□□□ 0.42
SDCBP-201ENST00000260130 ACP6Q9NPH0 428 aa17.66■□□□□ 0.42
SDCBP-201ENST00000260130 FAM207AQ9NSI2 230 aaPredicted RBP17.66■□□□□ 0.42
SDCBP-201ENST00000260130 NCANO14594 1321 aa17.66■□□□□ 0.42
SDCBP-201ENST00000260130 TRAV19A0A0A6YYK7 116 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 HEPACAM2A8MVW5 462 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 DPYSL4O14531 572 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 CYP26A1O43174 497 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 MED7O43513 233 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 SETSIPP0DME0 302 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 PFKLP17858 780 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 HDCP19113 662 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 ELF2Q15723 593 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 FILIP1LQ4L180 1135 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 SNX30Q5VWJ9 437 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 VITQ6UXI7 678 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 VSTM4Q8IW00 320 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 MFSD6LQ8IWD5 586 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 FAM71AQ8IYT1 594 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 RSPRY1Q96DX4 576 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 STK33Q9BYT3 514 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 SMG9Q9H0W8 520 aaKnown RBP17.65■□□□□ 0.42
SDCBP-201ENST00000260130 GANQ9H2C0 597 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 GMIPQ9P107 970 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 SCML2Q9UQR0 700 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 USP3Q9Y6I4 520 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 GREB1Q4ZG55 1949 aa17.65■□□□□ 0.42
SDCBP-201ENST00000260130 M0QYV0 167 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms