RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 HAUS5O94927 633 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 POLR2MP0CAP2 368 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 CCNB1P14635 433 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 GSPT1P15170 499 aaKnown RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 CHN1P15882 459 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 PDGFRAP16234 1089 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 LONP1P36776 959 aaKnown RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 RPL5P46777 297 aaKnown RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 AFF1P51825 1210 aaKnown RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 AP2S1P53680 142 aaPredicted RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 CKAP4Q07065 602 aaKnown RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 KYAT1Q16773 422 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 ARHGAP44Q17R89 818 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 SMTNL2Q2TAL5 461 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 CACHD1Q5VU97 1274 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 APOA5Q6Q788 366 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 CYP20A1Q6UW02 462 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 SLC9B2Q86UD5 537 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 NOSTRINQ8IVI9 506 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 DIS3L2Q8IYB7 885 aaKnown RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 DENND1AQ8TEH3 1009 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 SNX29Q8TEQ0 813 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 TGFBRAP1Q8WUH2 860 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 AKAP1Q92667 903 aaKnown RBP eCLIP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 FOXJ1Q92949 421 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 RAD51AP1Q96B01 352 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 PHF21AQ96BD5 680 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 TAMM41Q96BW9 452 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 MMS19Q96T76 1030 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 SCAND2PQ9GZW5 306 aaPredicted RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 RBM38Q9H0Z9 239 aaKnown RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 PRDM11Q9NQV5 511 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 ZC4H2Q9NQZ6 224 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 THEGQ9P2T0 379 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 LRFN2Q9ULH4 789 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 RPL26L1Q9UNX3 145 aaKnown RBP8.04□□□□□ -1.12
GPNMB-201ENST00000258733 PIAS3Q9Y6X2 628 aa8.04□□□□□ -1.12
GPNMB-201ENST00000258733 DBX1A6NMT0 343 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 TOR1AO14656 332 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 PDPK1O15530 556 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 ADAMTS2O95450 1211 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 PIM1P11309 404 aaPredicted RBP8.03□□□□□ -1.12
GPNMB-201ENST00000258733 CKBP12277 381 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 SLC26A2P50443 739 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 AK2P54819 239 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 STX1BP61266 288 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 SLC14A2Q15849 920 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 C6orf118Q5T5N4 469 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 PDPK2PQ6A1A2 396 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 ZSWIM9Q86XI8 627 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 ERI1Q8IV48 349 aaKnown RBP8.03□□□□□ -1.12
GPNMB-201ENST00000258733 TTC8Q8TAM2 541 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 CDCA5Q96FF9 252 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 VCPIP1Q96JH7 1222 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 ZC3H10Q96K80 434 aaKnown RBP8.03□□□□□ -1.12
GPNMB-201ENST00000258733 BIRC8Q96P09 236 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 SLC2A13Q96QE2 648 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 TMEM79Q9BSE2 394 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 TINF2Q9BSI4 451 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 KIFC3Q9BVG8 833 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 TINAGL1Q9GZM7 467 aaPredicted RBP8.03□□□□□ -1.12
GPNMB-201ENST00000258733 TMEM245Q9H330 911 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 OR51B5Q9H339 312 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 CUEDC2Q9H467 287 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 GLRX2Q9NS18 164 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 CAPN11Q9UMQ6 739 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 CAPN6Q9Y6Q1 641 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 KIDINS220Q9ULH0 1771 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 PSMD9O00233 223 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 RIMBP2O15034 1052 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 PTP4A3O75365 173 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 SNAPINO95295 136 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 CCNE1P24864 410 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 LMOD1P29536 600 aaPredicted RBP8.03□□□□□ -1.12
GPNMB-201ENST00000258733 GARSP41250 739 aaKnown RBP8.03□□□□□ -1.12
GPNMB-201ENST00000258733 NEK3P51956 506 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 GFPT1Q06210 699 aaPredicted RBP8.03□□□□□ -1.12
GPNMB-201ENST00000258733 COASYQ13057 564 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 PDIA6Q15084 440 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 FBXO48Q5FWF7 155 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 GPATCH4Q5T3I0 446 aaKnown RBP8.03□□□□□ -1.12
GPNMB-201ENST00000258733 C7orf61Q8IZ16 206 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 CATSPER1Q8NEC5 780 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 ADCY4Q8NFM4 1077 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 FBXO30Q8TB52 745 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 RAET1EQ8TD07 263 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 KRT35Q92764 455 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 TRIM63Q969Q1 353 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 MFSD14AQ96MC6 490 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 ZNF317Q96PQ6 595 aaPredicted RBP8.03□□□□□ -1.12
GPNMB-201ENST00000258733 ZKSCAN3Q9BRR0 538 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 NOC4LQ9BVI4 516 aaKnown RBP8.03□□□□□ -1.12
GPNMB-201ENST00000258733 ZCCHC2Q9C0B9 1178 aaKnown RBP8.03□□□□□ -1.12
GPNMB-201ENST00000258733 TMBIM4Q9HC24 238 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 ACTR3BQ9P1U1 418 aa8.03□□□□□ -1.12
GPNMB-201ENST00000258733 SETD1AO15047 1707 aaKnown RBP8.02□□□□□ -1.12
GPNMB-201ENST00000258733 HEATR9A2RTY3 570 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 TSPAN6O43657 245 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 RNASEH1O60930 286 aaKnown RBP8.02□□□□□ -1.13
GPNMB-201ENST00000258733 SHBGP04278 402 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms