RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 PARP9Q8IXQ6 854 aa17.27■□□□□ 0.36
UBQLN1-201ENST00000257468 SYT17Q9BSW7 474 aa17.27■□□□□ 0.36
UBQLN1-201ENST00000257468 DPEP3Q9H4B8 488 aa17.27■□□□□ 0.36
UBQLN1-201ENST00000257468 SLC24A2Q9UI40 661 aa17.27■□□□□ 0.36
UBQLN1-201ENST00000257468 COL1A2P08123 1366 aa17.27■□□□□ 0.36
UBQLN1-201ENST00000257468 E7ESA3 106 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 H7C0C1 242 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 TYROBPO43914 113 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 IL4RP24394 825 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 HOXA11P31270 313 aaPredicted RBP17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 GRM5P41594 1212 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 ATP5OP48047 213 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 NCALDP61601 193 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 ELF3P78545 371 aaPredicted RBP17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 KRT81Q14533 505 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 LDLRAD1Q5T700 205 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 FAXCQ5TGI0 409 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 OLFML1Q6UWY5 402 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 USP50Q70EL3 339 aaPredicted RBP17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 FAM228AQ86W67 206 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 PALM2Q8IXS6 379 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 CCDC63Q8NA47 563 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 ANKLE1Q8NAG6 615 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 CLEC4CQ8WTT0 213 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 FAM172AQ8WUF8 416 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 MIS12Q9H081 205 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 ECT2Q9H8V3 914 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 HEY1Q9Y5J3 304 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 CENPFP49454 3210 aa17.27■□□□□ 0.35
UBQLN1-201ENST00000257468 RBM47A0AV96 593 aaKnown RBP17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 BTBD19C9JJ37 291 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 MMP3P08254 477 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 ELK3P41970 407 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 KCNJ2P63252 427 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 GALNTL6Q49A17 601 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 ECHDC2Q86YB7 292 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 KHSRPQ92945 711 aaKnown RBP eCLIP17.26■□□□□ 0.351e-10■■■■□ 26.1
UBQLN1-201ENST00000257468 EMID1Q96A84 441 aaPredicted RBP17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 RNF157Q96PX1 679 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 APOL6Q9BWW8 343 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 MAGEB5Q9BZ81 275 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 ACSS3Q9H6R3 686 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 KAT6AQ92794 2004 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 PHBP35232 272 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 ATXN1P54253 815 aaKnown RBP17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 CCNA1P78396 465 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 RNASELQ05823 741 aaKnown RBP17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 SPARCL1Q14515 664 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 PDIK1LQ8N165 341 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 AGGF1Q8N302 714 aaeCLIP17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 CCDC33Q8N5R6 958 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 L3MBTL3Q96JM7 780 aaPredicted RBP17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 TRIM33Q9UPN9 1127 aa17.26■□□□□ 0.35
UBQLN1-201ENST00000257468 NDC80O14777 642 aa17.25■□□□□ 0.35
UBQLN1-201ENST00000257468 PAPSS1O43252 624 aaPredicted RBP17.25■□□□□ 0.35
UBQLN1-201ENST00000257468 PKDCCQ504Y2 493 aa17.25■□□□□ 0.35
UBQLN1-201ENST00000257468 LVRNQ6Q4G3 990 aa17.25■□□□□ 0.35
UBQLN1-201ENST00000257468 DPP9Q86TI2 863 aa17.25■□□□□ 0.35
UBQLN1-201ENST00000257468 KIF2BQ8N4N8 673 aa17.25■□□□□ 0.35
UBQLN1-201ENST00000257468 PQLC3Q8N755 202 aa17.25■□□□□ 0.35
UBQLN1-201ENST00000257468 PLD5Q8N7P1 536 aa17.25■□□□□ 0.35
UBQLN1-201ENST00000257468 OR6J1Q8NGC5 347 aa17.25■□□□□ 0.35
UBQLN1-201ENST00000257468 DCAKDQ8WVC6 231 aa17.25■□□□□ 0.35
UBQLN1-201ENST00000257468 OSMRQ99650 979 aa17.25■□□□□ 0.35
UBQLN1-201ENST00000257468 SNRNP25Q9BV90 132 aaKnown RBP17.25■□□□□ 0.35
UBQLN1-201ENST00000257468 NXF3Q9H4D5 531 aaKnown RBP17.25■□□□□ 0.35
UBQLN1-201ENST00000257468 PHTF1Q9UMS5 762 aa17.25■□□□□ 0.35
UBQLN1-201ENST00000257468 SMG5Q9UPR3 1016 aaKnown RBP17.25■□□□□ 0.35
UBQLN1-201ENST00000257468 KCNN4O15554 427 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 STAU1O95793 577 aaKnown RBP17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 KYAT1Q16773 422 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 PPP6R3Q5H9R7 873 aaPredicted RBP17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 ADGRD1Q6QNK2 874 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 C7orf31Q8N865 590 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 MZB1Q8WU39 189 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 USP29Q9HBJ7 922 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 PCDH18Q9HCL0 1135 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 SENP1Q9P0U3 644 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 KLHL14Q9P2G3 628 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 WDR91A4D1P6 747 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 KBTBD13C9JR72 458 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 AKAP5P24588 427 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 ADRA1DP25100 572 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 RBL1P28749 1068 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 YARSP54577 528 aaKnown RBP17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 KCNJ11Q14654 390 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 SNCBQ16143 134 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 PDK4Q16654 411 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 CATSPER4Q7RTX7 472 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 OR6B3Q8NGW1 331 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 PCDH19Q8TAB3 1148 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 FAF2Q96CS3 445 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 SNX27Q96L92 541 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 DHRS4Q9BTZ2 278 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 ADAMTS10Q9H324 1103 aa17.24■□□□□ 0.35
UBQLN1-201ENST00000257468 CCL15-CCL14A0A0B4J2E2 113 aa17.23■□□□□ 0.35
UBQLN1-201ENST00000257468 CCDC130P13994 396 aa17.23■□□□□ 0.35
UBQLN1-201ENST00000257468 SDC4P31431 198 aa17.23■□□□□ 0.35
UBQLN1-201ENST00000257468 RDXP35241 583 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms