RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 HACD1B0YJ81 288 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 GYG2O15488 501 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 CCNE2O96020 404 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 DNAJB2P25686 324 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 CNTFP26441 200 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 RGS4P49798 205 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 PDAP1Q13442 181 aaKnown RBP15.56■□□□□ 0.08
UBE4B-201ENST00000253251 IMPG1Q17R60 797 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 LONRF1Q17RB8 773 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 HIBCHQ6NVY1 386 aaPredicted RBP15.56■□□□□ 0.08
UBE4B-201ENST00000253251 KATNAL2Q8IYT4 538 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 GLIS3Q8NEA6 775 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 CAVIN3Q969G5 261 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 L3MBTL3Q96JM7 780 aaPredicted RBP15.56■□□□□ 0.08
UBE4B-201ENST00000253251 PURBQ96QR8 312 aaKnown RBP15.56■□□□□ 0.08
UBE4B-201ENST00000253251 NCANO14594 1321 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 TBKBP1A7MCY6 615 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 IGF2BP3O00425 579 aaKnown RBP eCLIP15.56■□□□□ 0.08
UBE4B-201ENST00000253251 TRIM66O15016 1216 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 RAG1P15918 1043 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 HSD17B3P37058 310 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 KCNMA1Q12791 1236 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 ECM1Q16610 540 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 CXCL17Q6UXB2 119 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 LRRC6Q86X45 466 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 DDX42Q86XP3 938 aaKnown RBP eCLIP15.56■□□□□ 0.08
UBE4B-201ENST00000253251 SENP8Q96LD8 212 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 TLR10Q9BXR5 811 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 UXTQ9UBK9 157 aaPredicted RBP15.56■□□□□ 0.08
UBE4B-201ENST00000253251 SPAG7O75391 227 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 POMCP01189 267 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 SLC29A2Q14542 456 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.56■□□□□ 0.08
UBE4B-201ENST00000253251 SPATA21Q7Z572 469 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 FAM131BQ86XD5 332 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 BAP1Q92560 729 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 ZNF669Q96BR6 464 aaPredicted RBP15.56■□□□□ 0.08
UBE4B-201ENST00000253251 SEZ6LQ9BYH1 1024 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 LRRC40Q9H9A6 602 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 PSD3Q9NYI0 1048 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 RIPK3Q9Y572 518 aa15.56■□□□□ 0.08
UBE4B-201ENST00000253251 MAFBQ9Y5Q3 323 aaPredicted RBP15.56■□□□□ 0.08
UBE4B-201ENST00000253251 A0A0B4J269 797 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 H0Y626 953 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 CYP1A2P05177 515 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 AARS2Q5JTZ9 985 aaKnown RBP15.55■□□□□ 0.08
UBE4B-201ENST00000253251 TEDDM1Q5T9Z0 273 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 XPO6Q96QU8 1125 aaKnown RBP15.55■□□□□ 0.08
UBE4B-201ENST00000253251 UBXN6Q9BZV1 441 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 TSPYL2Q9H2G4 693 aaPredicted RBP15.55■□□□□ 0.08
UBE4B-201ENST00000253251 TRPM3Q9HCF6 1732 aaPredicted RBP15.55■□□□□ 0.08
UBE4B-201ENST00000253251 TLR2O60603 784 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 MYO1DO94832 1006 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 SERPINB4P48594 390 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 EFL1Q7Z2Z2 1120 aaKnown RBP15.55■□□□□ 0.08
UBE4B-201ENST00000253251 TACO1Q9BSH4 297 aaKnown RBP15.55■□□□□ 0.08
UBE4B-201ENST00000253251 TMEM39AQ9NV64 488 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 CDH9Q9ULB4 789 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 SIGLEC16A6NMB1 481 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 HIST1H2AGP0C0S8 130 aaPredicted RBP15.55■□□□□ 0.08
UBE4B-201ENST00000253251 IRF1P10914 325 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 MBL2P11226 248 aaPredicted RBP15.55■□□□□ 0.08
UBE4B-201ENST00000253251 H2AFXP16104 143 aaPredicted RBP15.55■□□□□ 0.08
UBE4B-201ENST00000253251 HIST1H2ADP20671 130 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 STX3Q13277 289 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 SLC12A1Q13621 1099 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 POLD3Q15054 466 aaPredicted RBP15.55■□□□□ 0.08
UBE4B-201ENST00000253251 SHROOM1Q2M3G4 852 aaPredicted RBP15.55■□□□□ 0.08
UBE4B-201ENST00000253251 KIAA0319LQ8IZA0 1049 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 ACTL9Q8TC94 416 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 HIST1H2AHQ96KK5 128 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 HIST1H2AJQ99878 128 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 H2AFJQ9BTM1 129 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 LAMB4A4D0S4 1761 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 SLC12A8A0AV02 714 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 MAGEB16A2A368 324 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 CHUKO15111 745 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 ADCY6O43306 1168 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 GYS2P54840 703 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 PHF13Q86YI8 300 aaPredicted RBP15.55■□□□□ 0.08
UBE4B-201ENST00000253251 EMC1Q8N766 993 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 DCLK3Q9C098 648 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 SLC24A2Q9UI40 661 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 TRHDEQ9UKU6 1024 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 PKP3Q9Y446 797 aa15.55■□□□□ 0.08
UBE4B-201ENST00000253251 B4GALT4O60513 344 aa15.54■□□□□ 0.08
UBE4B-201ENST00000253251 DNAJC6O75061 913 aa15.54■□□□□ 0.08
UBE4B-201ENST00000253251 CYP2F1P24903 491 aa15.54■□□□□ 0.08
UBE4B-201ENST00000253251 DLG4P78352 724 aa15.54■□□□□ 0.08
UBE4B-201ENST00000253251 SFSWAPQ12872 951 aaKnown RBP15.54■□□□□ 0.08
UBE4B-201ENST00000253251 KCNT1Q5JUK3 1230 aa15.54■□□□□ 0.08
UBE4B-201ENST00000253251 DDX53Q86TM3 631 aaKnown RBP15.54■□□□□ 0.08
UBE4B-201ENST00000253251 UCMAQ8WVF2 138 aa15.54■□□□□ 0.08
UBE4B-201ENST00000253251 FOPNLQ96NB1 174 aa15.54■□□□□ 0.08
UBE4B-201ENST00000253251 GAD1Q99259 594 aa15.54■□□□□ 0.08
UBE4B-201ENST00000253251 ORC6Q9Y5N6 252 aa15.54■□□□□ 0.08
UBE4B-201ENST00000253251 TISP43B9A030 160 aa15.54■□□□□ 0.08
UBE4B-201ENST00000253251 TIMM44O43615 452 aa15.54■□□□□ 0.08
UBE4B-201ENST00000253251 MMP3P08254 477 aa15.54■□□□□ 0.08
UBE4B-201ENST00000253251 CHN1P15882 459 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms