RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 PPIL6Q8IXY8 311 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 NAT8LQ8N9F0 302 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 KBTBD7Q8WVZ9 684 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 TTC25Q96NG3 672 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 HAS3O00219 553 aa22.65■■□□□ 1.22
CLN6-201ENST00000249806 IL4RP24394 825 aa22.65■■□□□ 1.22
CLN6-201ENST00000249806 ADORA2BP29275 332 aa22.65■■□□□ 1.22
CLN6-201ENST00000249806 SOX4Q06945 474 aaPredicted RBP22.65■■□□□ 1.22
CLN6-201ENST00000249806 C1orf228Q6PIY5 440 aa22.65■■□□□ 1.22
CLN6-201ENST00000249806 TAX1BP1Q86VP1 789 aa22.65■■□□□ 1.22
CLN6-201ENST00000249806 MICALL1Q8N3F8 863 aa22.65■■□□□ 1.22
CLN6-201ENST00000249806 DYDC1Q8WWB3 177 aa22.65■■□□□ 1.22
CLN6-201ENST00000249806 MAML1Q92585 1016 aa22.65■■□□□ 1.22
CLN6-201ENST00000249806 KPNA7A9QM74 516 aa22.65■■□□□ 1.22
CLN6-201ENST00000249806 SDC4P31431 198 aa22.65■■□□□ 1.22
CLN6-201ENST00000249806 HUNKP57058 714 aa22.65■■□□□ 1.22
CLN6-201ENST00000249806 UBXN11Q5T124 520 aa22.65■■□□□ 1.22
CLN6-201ENST00000249806 UNC93AQ86WB7 457 aa22.65■■□□□ 1.22
CLN6-201ENST00000249806 P3H4Q92791 437 aa22.65■■□□□ 1.22
CLN6-201ENST00000249806 MRRFQ96E11 262 aaKnown RBP22.65■■□□□ 1.22
CLN6-201ENST00000249806 RNF157Q96PX1 679 aa22.65■■□□□ 1.22
CLN6-201ENST00000249806 RASA4BC9J798 803 aa22.64■■□□□ 1.21
CLN6-201ENST00000249806 RASA4O43374 803 aa22.64■■□□□ 1.21
CLN6-201ENST00000249806 GNL1P36915 607 aaPredicted RBP22.64■■□□□ 1.21
CLN6-201ENST00000249806 KRT81Q14533 505 aa22.64■■□□□ 1.21
CLN6-201ENST00000249806 PCBP1Q15365 356 aaKnown RBP eCLIP22.64■■□□□ 1.21
CLN6-201ENST00000249806 CA9Q16790 459 aa22.64■■□□□ 1.21
CLN6-201ENST00000249806 DARS2Q6PI48 645 aaKnown RBP22.64■■□□□ 1.21
CLN6-201ENST00000249806 ADAM33Q9BZ11 813 aa22.64■■□□□ 1.21
CLN6-201ENST00000249806 ZNF236Q9UL36 1845 aa22.64■■□□□ 1.21
CLN6-201ENST00000249806 PDCD11Q14690 1871 aaKnown RBP22.64■■□□□ 1.21
CLN6-201ENST00000249806 TMEM63AO94886 807 aa22.63■■□□□ 1.21
CLN6-201ENST00000249806 AXLP30530 894 aa22.63■■□□□ 1.21
CLN6-201ENST00000249806 GPX6P59796 221 aa22.63■■□□□ 1.21
CLN6-201ENST00000249806 NOMO1Q15155 1222 aa22.63■■□□□ 1.21
CLN6-201ENST00000249806 TAF1CQ15572 869 aaPredicted RBP22.63■■□□□ 1.21
CLN6-201ENST00000249806 SYCP2LQ5T4T6 812 aa22.63■■□□□ 1.21
CLN6-201ENST00000249806 ARRDC4Q8NCT1 418 aa22.63■■□□□ 1.21
CLN6-201ENST00000249806 GDAP1Q8TB36 358 aa22.63■■□□□ 1.21
CLN6-201ENST00000249806 PPM1EQ8WY54 764 aa22.63■■□□□ 1.21
CLN6-201ENST00000249806 MAP3K6O95382 1288 aa22.63■■□□□ 1.21
CLN6-201ENST00000249806 SETSIPP0DME0 302 aa22.63■■□□□ 1.21
CLN6-201ENST00000249806 CPT1AP50416 773 aa22.63■■□□□ 1.21
CLN6-201ENST00000249806 BASP1P80723 227 aaKnown RBP22.63■■□□□ 1.21
CLN6-201ENST00000249806 ARHGAP17Q68EM7 881 aa22.63■■□□□ 1.21
CLN6-201ENST00000249806 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.63■■□□□ 1.21
CLN6-201ENST00000249806 OSBPL7Q9BZF2 842 aa22.63■■□□□ 1.21
CLN6-201ENST00000249806 DPYSL4O14531 572 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 PIAS1O75925 651 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 CD4P01730 458 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 LCP1P13796 627 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 SSTR1P30872 391 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 ATXN1P54253 815 aaKnown RBP22.62■■□□□ 1.21
CLN6-201ENST00000249806 HDAC4P56524 1084 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 ROR1Q01973 937 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 BOLA3Q53S33 107 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 PIGWQ7Z7B1 504 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 PLD5Q8N7P1 536 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 ELAC2Q9BQ52 826 aaKnown RBP22.62■■□□□ 1.21
CLN6-201ENST00000249806 WDR83Q9BRX9 315 aaKnown RBP22.62■■□□□ 1.21
CLN6-201ENST00000249806 SNRNP25Q9BV90 132 aaKnown RBP22.62■■□□□ 1.21
CLN6-201ENST00000249806 MAGEB5Q9BZ81 275 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 IPPQ9Y573 584 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 CLUHO75153 1309 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 BRCA2P51587 3418 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 NDC80O14777 642 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 TFDP2Q14188 446 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 SPRED3Q2MJR0 410 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 MAP7D3Q8IWC1 876 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 PQLC3Q8N755 202 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 PYROXD1Q8WU10 500 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 LRRN4Q8WUT4 740 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 AP5M1Q9H0R1 490 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 PCDH18Q9HCL0 1135 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 XPO7Q9UIA9 1087 aaKnown RBP22.62■■□□□ 1.21
CLN6-201ENST00000249806 HEY1Q9Y5J3 304 aa22.62■■□□□ 1.21
CLN6-201ENST00000249806 TCP11X1B4DZS4 312 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 H7C0C1 242 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 ATP5OP48047 213 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 ARL4CP56559 192 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 ANKRD20A8PQ5CZ79 823 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 FAM47CQ5HY64 1035 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 CRYBG2Q8N1P7 616 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 ANKRD52Q8NB46 1076 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 SMG8Q8ND04 991 aaKnown RBP22.61■■□□□ 1.21
CLN6-201ENST00000249806 STK32AQ8WU08 396 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 USP6NLQ92738 828 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 KIF9Q9HAQ2 790 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 UBN1Q9NPG3 1134 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 C17orf102A2RUQ5 167 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 STIP1P31948 543 aaKnown RBP22.61■■□□□ 1.21
CLN6-201ENST00000249806 BST2Q10589 180 aaKnown RBP22.61■■□□□ 1.21
CLN6-201ENST00000249806 PDK2Q15119 407 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 PKN2Q16513 984 aaKnown RBP22.61■■□□□ 1.21
CLN6-201ENST00000249806 XKR4Q5GH76 650 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 PPP6R3Q5H9R7 873 aaPredicted RBP22.61■■□□□ 1.21
CLN6-201ENST00000249806 CCDC121Q6ZUS5 278 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 RIBC1Q8N443 379 aaPredicted RBP22.61■■□□□ 1.21
CLN6-201ENST00000249806 PCDH19Q8TAB3 1148 aa22.61■■□□□ 1.21
CLN6-201ENST00000249806 SLC2A14Q8TDB8 520 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms