RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 SEPT8Q92599 483 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 CCDC114Q96M63 670 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 B3GNT5Q9BYG0 378 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 MIS12Q9H081 205 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 C11orf49Q9H6J7 331 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 DNAJB4Q9UDY4 337 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 LIASO43766 372 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 CD48P09326 243 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 WARSP23381 471 aaKnown RBP24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 ADORA2BP29275 332 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 TKTP29401 623 aaKnown RBP24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 MTMR3Q13615 1198 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 TAZQ16635 292 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 C15orf59Q2T9L4 293 aaPredicted RBP24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 ANKRD52Q8NB46 1076 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 CNPY3Q9BT09 278 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 TBC1D13Q9NVG8 400 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 TMEM161AQ9NX61 479 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 DNPEPQ9ULA0 475 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 GOLGA6CA6NDK9 693 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 TRUB2O95900 331 aaKnown RBP24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 CXCL10P02778 98 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 GOLGA6DP0CG33 693 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 PDGFRAP16234 1089 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 KDELR1P24390 212 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 PKN2Q16513 984 aaKnown RBP24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 NOMO2Q5JPE7 1267 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 GOLGA6L1Q8N7Z2 621 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 ASNSD1Q9NWL6 643 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 GOLGA6AQ9NYA3 693 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 WHRNQ9P202 907 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 ASIC3Q9UHC3 531 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 USP18Q9UMW8 372 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 GAS8O95995 478 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 RPL9P32969 192 aaKnown RBP24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 PCK1P35558 622 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 SLC6A3Q01959 620 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 ZNF844Q08AG5 666 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 CCDC14Q49A88 953 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 DRICH1Q6PGQ1 229 aaPredicted RBP24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 RHBDF2Q6PJF5 856 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 DSTYKQ6XUX3 929 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 PRUNE1Q86TP1 453 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 CMASQ8NFW8 434 aaPredicted RBP24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 SLC2A14Q8TDB8 520 aa24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 FEZ2Q9UHY8 353 aaPredicted RBP24.46■■□□□ 1.51
SYNGR3-201ENST00000248121 GABRDO14764 452 aa24.45■■□□□ 1.5
SYNGR3-201ENST00000248121 RNF8O76064 485 aa24.45■■□□□ 1.5
SYNGR3-201ENST00000248121 RPL34P49207 117 aaKnown RBP24.45■■□□□ 1.5
SYNGR3-201ENST00000248121 DSC1Q08554 894 aa24.45■■□□□ 1.5
SYNGR3-201ENST00000248121 BST2Q10589 180 aaKnown RBP24.45■■□□□ 1.5
SYNGR3-201ENST00000248121 ODF2Q5BJF6 829 aa24.45■■□□□ 1.5
SYNGR3-201ENST00000248121 CEP85LQ5SZL2 805 aa24.45■■□□□ 1.5
SYNGR3-201ENST00000248121 UBAP2Q5T6F2 1119 aaKnown RBP24.45■■□□□ 1.5
SYNGR3-201ENST00000248121 CFAP57Q96MR6 1250 aa24.45■■□□□ 1.5
SYNGR3-201ENST00000248121 LRRC4CQ9HCJ2 640 aa24.45■■□□□ 1.5
SYNGR3-201ENST00000248121 VWA8A3KMH1 1905 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 BCAT1P54687 386 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 SPDYCQ5MJ68 293 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 CRIPAKQ8N1N5 446 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 CLEC4CQ8WTT0 213 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 HAUS1Q96CS2 278 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 TMEM39AQ9NV64 488 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 CLTBP09497 229 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 KLRC2P26717 231 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 PMS2P54278 862 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 COLGALT2Q8IYK4 626 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 GLIS1Q8NBF1 620 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 B3GALNT2Q8NCR0 500 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 SNF8Q96H20 258 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 FAM129AQ9BZQ8 928 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 AAASQ9NRG9 546 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 DDX43Q9NXZ2 648 aaKnown RBP24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 PSD3Q9NYI0 1048 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 EFR3BQ9Y2G0 817 aa24.44■■□□□ 1.5
SYNGR3-201ENST00000248121 ALPK3Q96L96 1907 aa24.43■■□□□ 1.5
SYNGR3-201ENST00000248121 CLDN5O00501 218 aa24.43■■□□□ 1.5
SYNGR3-201ENST00000248121 DPYSL4O14531 572 aa24.43■■□□□ 1.5
SYNGR3-201ENST00000248121 CALCOCO2Q13137 446 aa24.43■■□□□ 1.5
SYNGR3-201ENST00000248121 BYSLQ13895 437 aaKnown RBP24.43■■□□□ 1.5
SYNGR3-201ENST00000248121 OASLQ15646 514 aaKnown RBP24.43■■□□□ 1.5
SYNGR3-201ENST00000248121 KCTD16Q68DU8 428 aa24.43■■□□□ 1.5
SYNGR3-201ENST00000248121 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.43■■□□□ 1.5
SYNGR3-201ENST00000248121 SH2D3CQ8N5H7 860 aa24.43■■□□□ 1.5
SYNGR3-201ENST00000248121 CASD1Q96PB1 797 aa24.43■■□□□ 1.5
SYNGR3-201ENST00000248121 RTP3Q9BQQ7 232 aa24.43■■□□□ 1.5
SYNGR3-201ENST00000248121 MTRF1LQ9UGC7 380 aaKnown RBP24.43■■□□□ 1.5
SYNGR3-201ENST00000248121 LTBP2Q14767 1821 aa24.43■■□□□ 1.5
SYNGR3-201ENST00000248121 ITIH2P19823 946 aa24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 VPS41P49754 854 aa24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 DMTNQ08495 405 aa24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 CDO1Q16878 200 aa24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 ANKLE1Q8NAG6 615 aa24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 HSPH1Q92598 858 aa24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 APBB2Q92870 758 aa24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 TNIP3Q96KP6 325 aa24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 PABPC3Q9H361 631 aaKnown RBP24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 TMBIM4Q9HC24 238 aa24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 CRTAC1Q9NQ79 661 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms