RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 ISM2Q6H9L7 571 aa17.14■□□□□ 0.33
CLPP-201ENST00000245816 SCARA5Q6ZMJ2 495 aa17.14■□□□□ 0.33
CLPP-201ENST00000245816 TTC39CQ8N584 583 aa17.14■□□□□ 0.33
CLPP-201ENST00000245816 MLKLQ8NB16 471 aa17.14■□□□□ 0.33
CLPP-201ENST00000245816 FBXL13Q8NEE6 735 aa17.14■□□□□ 0.33
CLPP-201ENST00000245816 SCAMP5Q8TAC9 235 aa17.14■□□□□ 0.33
CLPP-201ENST00000245816 ZFRQ96KR1 1074 aaKnown RBP17.14■□□□□ 0.33
CLPP-201ENST00000245816 TWNKQ96RR1 684 aa17.14■□□□□ 0.33
CLPP-201ENST00000245816 DNAI2Q9GZS0 605 aa17.14■□□□□ 0.33
CLPP-201ENST00000245816 NUP62CLQ9H1M0 184 aa17.14■□□□□ 0.33
CLPP-201ENST00000245816 APOBEC3GQ9HC16 384 aaKnown RBP17.14■□□□□ 0.33
CLPP-201ENST00000245816 DUS2Q9NX74 493 aaKnown RBP17.14■□□□□ 0.33
CLPP-201ENST00000245816 DLL3Q9NYJ7 618 aa17.14■□□□□ 0.33
CLPP-201ENST00000245816 IL37Q9NZH6 218 aa17.14■□□□□ 0.33
CLPP-201ENST00000245816 EHD2Q9NZN4 543 aa17.14■□□□□ 0.33
CLPP-201ENST00000245816 ARHGAP26Q9UNA1 814 aa17.14■□□□□ 0.33
CLPP-201ENST00000245816 EML5Q05BV3 1969 aa17.14■□□□□ 0.33
CLPP-201ENST00000245816 KIAA1549LQ6ZVL6 1849 aa17.14■□□□□ 0.33
CLPP-201ENST00000245816 TRAV19A0A0A6YYK7 116 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 TRIM49BA6NDI0 452 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 LEFTY2O00292 366 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 CKMP06732 381 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 TRIM49P0CI25 452 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 TRIM49CP0CI26 452 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 TRIM21P19474 475 aaKnown RBP17.13■□□□□ 0.33
CLPP-201ENST00000245816 OPRD1P41143 372 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 MXI1P50539 228 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 MARSP56192 900 aaKnown RBP17.13■□□□□ 0.33
CLPP-201ENST00000245816 C1orf228Q6PIY5 440 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 FUKQ8N0W3 1084 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 CRYBG2Q8N1P7 616 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 TTC16Q8NEE8 873 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 TAS1R2Q8TE23 839 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 NELFBQ8WX92 580 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 SMOQ99835 787 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 DUSP9Q99956 384 aaKnown RBP17.13■□□□□ 0.33
CLPP-201ENST00000245816 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.13■□□□□ 0.331e-9■■■■■ 76.9
CLPP-201ENST00000245816 RAB20Q9NX57 234 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 SDK1Q7Z5N4 2213 aa17.13■□□□□ 0.33
CLPP-201ENST00000245816 MED19A0JLT2 244 aaPredicted RBP17.12■□□□□ 0.33
CLPP-201ENST00000245816 RNF40O75150 1001 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 HOXA6P31267 233 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 ASPAP45381 313 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 SLC7A9P82251 487 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 INCA1Q0VD86 236 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 PDGFRLQ15198 375 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 SKOR2Q2VWA4 1001 aaPredicted RBP17.12■□□□□ 0.33
CLPP-201ENST00000245816 CT47A1Q5JQC4 288 aaPredicted RBP17.12■□□□□ 0.33
CLPP-201ENST00000245816 ACOT1Q86TX2 421 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 FAM35AQ86V20 835 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 SYNPOQ8N3V7 929 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 C12orf29Q8N999 325 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 WHAMMQ8TF30 809 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 SLC35C1Q96A29 364 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 EEF2KMTQ96G04 330 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 HINFPQ9BQA5 517 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 ELOVL4Q9GZR5 314 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 NIF3L1Q9GZT8 377 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 RWDD2AQ9UIY3 292 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 SPTBN2O15020 2390 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 MYOFQ9NZM1 2061 aa17.12■□□□□ 0.33
CLPP-201ENST00000245816 BIN1O00499 593 aa17.11■□□□□ 0.33
CLPP-201ENST00000245816 TRIM66O15016 1216 aa17.11■□□□□ 0.33
CLPP-201ENST00000245816 P4HA2O15460 535 aa17.11■□□□□ 0.33
CLPP-201ENST00000245816 CCDC130P13994 396 aa17.11■□□□□ 0.33
CLPP-201ENST00000245816 RSPO4Q2I0M5 234 aaPredicted RBP17.11■□□□□ 0.33
CLPP-201ENST00000245816 KLHL10Q6JEL2 608 aa17.11■□□□□ 0.33
CLPP-201ENST00000245816 WDR5BQ86VZ2 330 aa17.11■□□□□ 0.33
CLPP-201ENST00000245816 LONP2Q86WA8 852 aa17.11■□□□□ 0.33
CLPP-201ENST00000245816 ADGRG2Q8IZP9 1017 aa17.11■□□□□ 0.33
CLPP-201ENST00000245816 P2RY13Q9BPV8 354 aa17.11■□□□□ 0.33
CLPP-201ENST00000245816 TRPM5Q9NZQ8 1165 aa17.11■□□□□ 0.33
CLPP-201ENST00000245816 NCDNQ9UBB6 729 aa17.11■□□□□ 0.33
CLPP-201ENST00000245816 CHORDC1Q9UHD1 332 aaPredicted RBP17.11■□□□□ 0.33
CLPP-201ENST00000245816 CPQQ9Y646 472 aa17.11■□□□□ 0.33
CLPP-201ENST00000245816 ATP8B3O60423 1300 aa17.11■□□□□ 0.33
CLPP-201ENST00000245816 FAM92AA1XBS5 289 aa17.1■□□□□ 0.33
CLPP-201ENST00000245816 HHLA1C9JL84 531 aa17.1■□□□□ 0.33
CLPP-201ENST00000245816 K7EQS6 105 aa17.1■□□□□ 0.33
CLPP-201ENST00000245816 ZDHHC11BP0C7U3 371 aa17.1■□□□□ 0.33
CLPP-201ENST00000245816 PRKCSHP14314 528 aaPredicted RBP17.1■□□□□ 0.33
CLPP-201ENST00000245816 HNRNPLP14866 589 aaKnown RBP eCLIP17.1■□□□□ 0.33
CLPP-201ENST00000245816 SLC6A11P48066 632 aa17.1■□□□□ 0.33
CLPP-201ENST00000245816 PPP3CCP48454 512 aa17.1■□□□□ 0.33
CLPP-201ENST00000245816 NDST1P52848 882 aa17.1■□□□□ 0.33
CLPP-201ENST00000245816 NRLP54845 237 aa17.1■□□□□ 0.33
CLPP-201ENST00000245816 SPEM2Q0P670 501 aa17.1■□□□□ 0.33
CLPP-201ENST00000245816 IFRD2Q12894 506 aaPredicted RBP17.1■□□□□ 0.33
CLPP-201ENST00000245816 TCERG1LQ5VWI1 586 aa17.1■□□□□ 0.33
CLPP-201ENST00000245816 GPRIN1Q7Z2K8 1008 aa17.1■□□□□ 0.33
CLPP-201ENST00000245816 C12orf40Q86WS4 652 aa17.1■□□□□ 0.33
CLPP-201ENST00000245816 NUP93Q8N1F7 819 aa17.1■□□□□ 0.33
CLPP-201ENST00000245816 P2RY11Q96G91 374 aa17.1■□□□□ 0.33
CLPP-201ENST00000245816 SMPD4Q9NXE4 827 aa17.1■□□□□ 0.33
CLPP-201ENST00000245816 CTNND2Q9UQB3 1225 aa17.1■□□□□ 0.33
CLPP-201ENST00000245816 COCHO43405 550 aa17.09■□□□□ 0.33
CLPP-201ENST00000245816 GREM1O60565 184 aa17.09■□□□□ 0.33
CLPP-201ENST00000245816 CLSTN1O94985 981 aa17.09■□□□□ 0.33
CLPP-201ENST00000245816 CYP17A1P05093 508 aa17.09■□□□□ 0.33
CLPP-201ENST00000245816 PFKLP17858 780 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms