RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 RBP3P10745 1247 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 PDGFRAP16234 1089 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 ARL1P40616 181 aaPredicted RBP11.99□□□□□ -0.49
SOX9-201ENST00000245479 PCYT1AP49585 367 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 SESN2P58004 480 aaPredicted RBP11.99□□□□□ -0.49
SOX9-201ENST00000245479 GTF2BQ00403 316 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 OTUD4Q01804 1114 aaKnown RBP11.99□□□□□ -0.49
SOX9-201ENST00000245479 TMPRSS6Q8IU80 811 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 SCUBE3Q8IX30 993 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 RASGEF1CQ8N431 466 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 SPATA18Q8TC71 538 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 WDR60Q8WVS4 1066 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 SHC3Q92529 594 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 KIF12Q96FN5 646 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 RAB6BQ9NRW1 208 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 COMMD3-BMI1R4GMX3 469 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 SUPT20HL2P0C7V6 817 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 BGNP21810 368 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 UBA1P22314 1058 aaKnown RBP11.99□□□□□ -0.49
SOX9-201ENST00000245479 STX3Q13277 289 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 SUPT20HL1Q3ZLR7 823 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 COBLL1Q53SF7 1204 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 C1orf220Q5T0J3 134 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 FAM160B1Q5W0V3 765 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 MTHFD1LQ6UB35 978 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 CES3Q6UWW8 571 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 JOSD2Q8TAC2 188 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 FEZF2Q8TBJ5 459 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 TCP10LQ8TDR4 215 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 DEPDC1BQ8WUY9 529 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 SENP7Q9BQF6 1050 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 MRPL46Q9H2W6 279 aaKnown RBP11.99□□□□□ -0.49
SOX9-201ENST00000245479 TBC1D23Q9NUY8 699 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 PCYOX1Q9UHG3 505 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 TIMM13Q9Y5L4 95 aaPredicted RBP11.99□□□□□ -0.49
SOX9-201ENST00000245479 ZNF541Q9H0D2 1346 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 A8MXQ7 604 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 HSPA4LO95757 839 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 AKAP5P24588 427 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 PRAMEP78395 509 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 CACNB2Q08289 660 aaPredicted RBP11.98□□□□□ -0.49
SOX9-201ENST00000245479 TFDP1Q14186 410 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 FSCBQ5H9T9 825 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 PRAMEF19Q5SWL8 479 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 MAP4K3Q8IVH8 894 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 ADAM32Q8TC27 787 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 E2F7Q96AV8 911 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 SCYL1Q96KG9 808 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.98□□□□□ -0.49
SOX9-201ENST00000245479 WDR35Q9P2L0 1181 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 APPL1Q9UKG1 709 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 A0A1W2PPM1 405 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 GTPBP10A4D1E9 387 aaKnown RBP11.98□□□□□ -0.49
SOX9-201ENST00000245479 PLSCR1O15162 318 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 ZNF189O75820 626 aaPredicted RBP11.98□□□□□ -0.49
SOX9-201ENST00000245479 CTSHP09668 335 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 SLC1A1P43005 524 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 EIF3EP60228 445 aaKnown RBP11.98□□□□□ -0.49
SOX9-201ENST00000245479 PPIDQ08752 370 aaKnown RBP11.98□□□□□ -0.49
SOX9-201ENST00000245479 BMT2Q1RMZ1 405 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 EMC10Q5UCC4 262 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 DENND1BQ6P3S1 775 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 SEPT1Q8WYJ6 367 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 MED10Q9BTT4 135 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 KLHL4Q9C0H6 718 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 PARVAQ9NVD7 372 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 KCNN4O15554 427 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 HCRTO43612 131 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 PRPSAP2O60256 369 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 PEX11AO75192 247 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 FKBP6O75344 327 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 RARBP10826 455 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 ECHS1P30084 290 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 VGLL4Q14135 290 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 CHI3L2Q15782 390 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 RAB6CQ53S08 254 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 C4orf50Q6ZRC1 276 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 CATSPER4Q7RTX7 472 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 AGBL3Q8NEM8 1001 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 PYDC1Q8WXC3 89 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 APOL2Q9BQE5 337 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 MRPL4Q9BYD3 311 aaKnown RBP11.98□□□□□ -0.49
SOX9-201ENST00000245479 RAB6CQ9H0N0 254 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 DMAC2Q9NW81 257 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 AFG3L2Q9Y4W6 797 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 CNTNAP1P78357 1384 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 MYH7BA7E2Y1 1941 aa11.98□□□□□ -0.49
SOX9-201ENST00000245479 UBR2Q8IWV8 1755 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 ATP6V1G1O75348 118 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 GPC4O75487 556 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 EEF1DP29692 281 aaKnown RBP11.97□□□□□ -0.49
SOX9-201ENST00000245479 SERPINB8P50452 374 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 CENPCQ03188 943 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 CAPSQ13938 189 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 GSTA3Q16772 222 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 KCTD21Q4G0X4 260 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 ATF7IP2Q5U623 682 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 MFSD5Q6N075 450 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 EME1Q96AY2 570 aa11.97□□□□□ -0.49
SOX9-201ENST00000245479 LENG1Q96BZ8 264 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms