RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 RBM41Q96IZ5 413 aaKnown RBP18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 SMOQ99835 787 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 ACBD6Q9BR61 282 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 ERP44Q9BS26 406 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 NRDE2Q9H7Z3 1164 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 MED4Q9NPJ6 270 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 TMLHEQ9NVH6 421 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 GOLGA6BA6NDN3 693 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 SDC4P31431 198 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 KCNJ1P48048 391 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 NDUFV1P49821 464 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 LBX1P52954 281 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 KLF1Q13351 362 aaPredicted RBP18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 FAM71BQ8TC56 605 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 ATG4AQ8WYN0 398 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 PAWRQ96IZ0 340 aaKnown RBP18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 PEBP4Q96S96 227 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 FAM118BQ9BPY3 351 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 LRRC19Q9H756 370 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 CYLDQ9NQC7 956 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 FAM114A2Q9NRY5 505 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 TMEM39AQ9NV64 488 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 DDX56Q9NY93 547 aaKnown RBP18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 VPS18Q9P253 973 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 USP18Q9UMW8 372 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 PCDHB8Q9UN66 801 aa18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 R3HDM2Q9Y2K5 976 aaKnown RBP18.8■□□□□ 0.6
KLHDC3-201ENST00000244670 YWHAHQ04917 246 aaPredicted RBP18.79■□□□□ 0.6
KLHDC3-201ENST00000244670 ADCY2Q08462 1091 aa18.79■□□□□ 0.6
KLHDC3-201ENST00000244670 SNX1Q13596 522 aa18.79■□□□□ 0.6
KLHDC3-201ENST00000244670 SPOCD1Q6ZMY3 1216 aa18.79■□□□□ 0.6
KLHDC3-201ENST00000244670 SLC26A9Q7LBE3 791 aa18.79■□□□□ 0.6
KLHDC3-201ENST00000244670 POLNQ7Z5Q5 900 aa18.79■□□□□ 0.6
KLHDC3-201ENST00000244670 LRRTM3Q86VH5 581 aa18.79■□□□□ 0.6
KLHDC3-201ENST00000244670 THEM5Q8N1Q8 247 aa18.79■□□□□ 0.6
KLHDC3-201ENST00000244670 ZMIZ2Q8NF64 920 aa18.79■□□□□ 0.6
KLHDC3-201ENST00000244670 HSPH1Q92598 858 aa18.79■□□□□ 0.6
KLHDC3-201ENST00000244670 ARMC5Q96C12 935 aa18.79■□□□□ 0.6
KLHDC3-201ENST00000244670 LRRC4Q9HBW1 653 aa18.79■□□□□ 0.6
KLHDC3-201ENST00000244670 NGRNQ9NPE2 291 aaKnown RBP18.79■□□□□ 0.6
KLHDC3-201ENST00000244670 CHST7Q9NS84 486 aa18.79■□□□□ 0.6
KLHDC3-201ENST00000244670 TBX21Q9UL17 535 aa18.79■□□□□ 0.6
KLHDC3-201ENST00000244670 TBKBP1A7MCY6 615 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 TADA2AO75478 443 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 UPP2O95045 317 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 TRUB2O95900 331 aaKnown RBP18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 KRT7P08729 469 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 TFE3P19532 575 aaPredicted RBP18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 TYMPP19971 482 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 PAX3P23760 479 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 GJA8P48165 433 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 FNTAP49354 379 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 GYS2P54840 703 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 ACAP1Q15027 740 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 FAM171BQ6P995 826 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 GPRIN1Q7Z2K8 1008 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 NPAS4Q8IUM7 802 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 SIX6OS1Q8N1H7 587 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 SPATA18Q8TC71 538 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 FAM172AQ8WUF8 416 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 FAM149B1Q96BN6 582 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 FAN1Q9Y2M0 1017 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 FNDC1Q4ZHG4 1894 aaPredicted RBP18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 VWA8A3KMH1 1905 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 DPYSL4O14531 572 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 NRP1O14786 923 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 OR4Q2P0C623 313 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 BDNFP23560 247 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 HSPA9P38646 679 aaKnown RBP18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 PBX3P40426 434 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 CETN2P41208 172 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 TKTL1P51854 596 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 ADCY1Q08828 1119 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 LRRC26Q2I0M4 334 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 C1orf53Q5VUE5 145 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 SCYL2Q6P3W7 929 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.78■□□□□ 0.64e-7■■■■□ 23.1
KLHDC3-201ENST00000244670 CCDC105Q8IYK2 499 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 PIK3R5Q8WYR1 880 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 KCTD13Q8WZ19 329 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 SMARCD1Q96GM5 515 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 RASAL2Q9UJF2 1139 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 NLRC5Q86WI3 1866 aa18.78■□□□□ 0.6
KLHDC3-201ENST00000244670 ARHGEF37A1IGU5 675 aa18.77■□□□□ 0.6
KLHDC3-201ENST00000244670 TMEM189-UBE2V1I3L0A0 370 aa18.77■□□□□ 0.6
KLHDC3-201ENST00000244670 CD48P09326 243 aa18.77■□□□□ 0.6
KLHDC3-201ENST00000244670 CLTBP09497 229 aa18.77■□□□□ 0.6
KLHDC3-201ENST00000244670 PCK1P35558 622 aa18.77■□□□□ 0.6
KLHDC3-201ENST00000244670 TSPY1Q01534 308 aa18.77■□□□□ 0.6
KLHDC3-201ENST00000244670 CRIPAKQ8N1N5 446 aa18.77■□□□□ 0.6
KLHDC3-201ENST00000244670 MAIP1Q8WWC4 291 aa18.77■□□□□ 0.6
KLHDC3-201ENST00000244670 ZIM3Q96PE6 472 aa18.77■□□□□ 0.6
KLHDC3-201ENST00000244670 PKMYT1Q99640 499 aa18.77■□□□□ 0.6
KLHDC3-201ENST00000244670 ADAM33Q9BZ11 813 aa18.77■□□□□ 0.6
KLHDC3-201ENST00000244670 ZMYND15Q9H091 742 aa18.77■□□□□ 0.6
KLHDC3-201ENST00000244670 C11orf49Q9H6J7 331 aa18.77■□□□□ 0.6
KLHDC3-201ENST00000244670 ZDHHC18Q9NUE0 388 aa18.77■□□□□ 0.6
KLHDC3-201ENST00000244670 ADAM21Q9UKJ8 722 aa18.77■□□□□ 0.6
KLHDC3-201ENST00000244670 SNX24Q9Y343 169 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms