RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 TMEM175Q9BSA9 504 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 COLEC11Q9BWP8 271 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 LRRC19Q9H756 370 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 EPB41L5Q9HCM4 733 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 PCSK1NQ9UHG2 260 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 FAN1Q9Y2M0 1017 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 LRRD1A4D1F6 860 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 TRIM43BA6NCK2 446 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 GALTP07902 379 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 HSPA1AP0DMV8 641 aaKnown RBP15.94■□□□□ 0.14
HDHD3-201ENST00000238379 HSPA1BP0DMV9 641 aaKnown RBP15.94■□□□□ 0.14
HDHD3-201ENST00000238379 BDNFP23560 247 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 PTPN7P35236 360 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 CETN2P41208 172 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 CDKN2BP42772 138 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 BCAR1P56945 870 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 CDO1Q16878 200 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 SMTNL2Q2TAL5 461 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 ZFYVE27Q5T4F4 411 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 GPRIN1Q7Z2K8 1008 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 SIX6OS1Q8N1H7 587 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 CMASQ8NFW8 434 aaPredicted RBP15.94■□□□□ 0.14
HDHD3-201ENST00000238379 CENPIQ92674 756 aaPredicted RBP15.94■□□□□ 0.14
HDHD3-201ENST00000238379 TRIM43Q96BQ3 446 aaPredicted RBP15.94■□□□□ 0.14
HDHD3-201ENST00000238379 DDX23Q9BUQ8 820 aaKnown RBP15.94■□□□□ 0.14
HDHD3-201ENST00000238379 GPR62Q9BZJ7 368 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 PCYOX1Q9UHG3 505 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 FNDC1Q4ZHG4 1894 aaPredicted RBP15.93■□□□□ 0.14
HDHD3-201ENST00000238379 HSF2BPO75031 334 aa15.93■□□□□ 0.14
HDHD3-201ENST00000238379 TIMP1P01033 207 aa15.93■□□□□ 0.14
HDHD3-201ENST00000238379 KRT10P13645 584 aa15.93■□□□□ 0.14
HDHD3-201ENST00000238379 TFE3P19532 575 aaPredicted RBP15.93■□□□□ 0.14
HDHD3-201ENST00000238379 COILP38432 576 aaPredicted RBP15.93■□□□□ 0.14
HDHD3-201ENST00000238379 PTGIRP43119 386 aa15.93■□□□□ 0.14
HDHD3-201ENST00000238379 YWHAZP63104 245 aaKnown RBP15.93■□□□□ 0.14
HDHD3-201ENST00000238379 DR1Q01658 176 aa15.93■□□□□ 0.14
HDHD3-201ENST00000238379 ADCY2Q08462 1091 aa15.93■□□□□ 0.14
HDHD3-201ENST00000238379 DHX34Q14147 1143 aaKnown RBP15.93■□□□□ 0.14
HDHD3-201ENST00000238379 MRPL58Q14197 206 aaKnown RBP15.93■□□□□ 0.14
HDHD3-201ENST00000238379 TAZQ16635 292 aa15.93■□□□□ 0.14
HDHD3-201ENST00000238379 TFDP3Q5H9I0 405 aa15.93■□□□□ 0.14
HDHD3-201ENST00000238379 VARS2Q5ST30 1063 aaKnown RBP15.93■□□□□ 0.14
HDHD3-201ENST00000238379 CCDC137Q6PK04 289 aaKnown RBP15.93■□□□□ 0.14
HDHD3-201ENST00000238379 LRRC43Q8N309 656 aa15.93■□□□□ 0.14
HDHD3-201ENST00000238379 FAM172AQ8WUF8 416 aa15.93■□□□□ 0.14
HDHD3-201ENST00000238379 C1orf54Q8WWF1 131 aa15.93■□□□□ 0.14
HDHD3-201ENST00000238379 ADAM33Q9BZ11 813 aa15.93■□□□□ 0.14
HDHD3-201ENST00000238379 ULBP1Q9BZM6 244 aa15.93■□□□□ 0.14
HDHD3-201ENST00000238379 ZCWPW1Q9H0M4 648 aa15.93■□□□□ 0.14
HDHD3-201ENST00000238379 NGRNQ9NPE2 291 aaKnown RBP15.93■□□□□ 0.14
HDHD3-201ENST00000238379 DMAP1Q9NPF5 467 aaPredicted RBP15.93■□□□□ 0.14
HDHD3-201ENST00000238379 hCG_1818297A0A087WSY0 165 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 ESYT3A0FGR9 886 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 KIAA0355O15063 1070 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 DGKIO75912 1065 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 FBXO21O94952 628 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 UPP2O95045 317 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 FGFR3P22607 806 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 KDELR1P24390 212 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 MATKP42679 507 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 FNTAP49354 379 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 HDAC4P56524 1084 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 TRADDQ15628 312 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 KCTD19Q17RG1 926 aaPredicted RBP15.92■□□□□ 0.14
HDHD3-201ENST00000238379 FAM171A1Q5VUB5 890 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 MTERF4Q7Z6M4 381 aaKnown RBP15.92■□□□□ 0.14
HDHD3-201ENST00000238379 CASKIN2Q8WXE0 1202 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 NCAPGQ9BPX3 1015 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 TMEM106CQ9BVX2 250 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 CNGB3Q9NQW8 809 aa15.92■□□□□ 0.14
HDHD3-201ENST00000238379 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.92■□□□□ 0.14
HDHD3-201ENST00000238379 R3HDM2Q9Y2K5 976 aaKnown RBP15.92■□□□□ 0.14
HDHD3-201ENST00000238379 ABHD14A-ACY1A0A1B0GW23 586 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 FAM187AA6NFU0 413 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 NT5C1B-RDH14C9J2C7 533 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 PRPSAP2O60256 369 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 OR4Q2P0C623 313 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 CSF2RAP15509 400 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 CAPN2P17655 700 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 PBX3P40426 434 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 CARSP49589 748 aaKnown RBP15.91■□□□□ 0.14
HDHD3-201ENST00000238379 DAOAP59103 153 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 ODF2Q5BJF6 829 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 FUT10Q6P4F1 479 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 C4orf50Q6ZRC1 276 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 TMEM173Q86WV6 379 aaPredicted RBP15.91■□□□□ 0.14
HDHD3-201ENST00000238379 GSPT2Q8IYD1 628 aaKnown RBP15.91■□□□□ 0.14
HDHD3-201ENST00000238379 DEFB106AQ8N104 65 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 ATG4AQ8WYN0 398 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 SEC14L1Q92503 715 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 FAM149B1Q96BN6 582 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 DCLK3Q9C098 648 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 PNPLA8Q9NP80 782 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 CHST7Q9NS84 486 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 EFR3BQ9Y2G0 817 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 VWA8A3KMH1 1905 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 SF3B1O75533 1304 aaKnown RBP eCLIP15.91■□□□□ 0.14
HDHD3-201ENST00000238379 NLRC5Q86WI3 1866 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 DAB1O75553 588 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 ENDOD1O94919 500 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms