RNA–Protein interactions for RNA: ENST00000219476.7

TSC2-201, Transcript of TSC complex subunit 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TSC2, Length 6,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-201ENST00000219476 ELL3Q9HB65 397 aaPredicted RBP17.12■□□□□ 0.33
TSC2-201ENST00000219476 GGA3Q9NZ52 723 aa17.12■□□□□ 0.33
TSC2-201ENST00000219476 NARFQ9UHQ1 456 aa17.12■□□□□ 0.33
TSC2-201ENST00000219476 SNRPAP09012 282 aaKnown RBP17.12■□□□□ 0.33
TSC2-201ENST00000219476 SCARA3Q6AZY7 606 aa17.12■□□□□ 0.33
TSC2-201ENST00000219476 NECAB2Q7Z6G3 386 aa17.12■□□□□ 0.33
TSC2-201ENST00000219476 GPRASP2Q96D09 838 aa17.12■□□□□ 0.33
TSC2-201ENST00000219476 KLK14Q9P0G3 267 aa17.12■□□□□ 0.33
TSC2-201ENST00000219476 AAR2Q9Y312 384 aaKnown RBP17.12■□□□□ 0.33
TSC2-201ENST00000219476 M0QYT0 321 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 STRIP1Q5VSL9 837 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 DAB2IPQ5VWQ8 1189 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 FAAH2Q6GMR7 532 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 MARK2Q7KZI7 788 aaKnown RBP17.11■□□□□ 0.33
TSC2-201ENST00000219476 PCSK9Q8NBP7 692 aaKnown RBP17.11■□□□□ 0.33
TSC2-201ENST00000219476 TRPC4APQ8TEL6 797 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 RNPC3Q96LT9 517 aaKnown RBP17.11■□□□□ 0.33
TSC2-201ENST00000219476 MARK1Q9P0L2 795 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 AP1G2O75843 785 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 NMT1P30419 496 aaKnown RBP17.11■□□□□ 0.33
TSC2-201ENST00000219476 CLCN6P51797 869 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 ARHGDIBP52566 201 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 TRIQKQ629K1 86 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 CASP12Q6UXS9 341 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 TRPM8Q7Z2W7 1104 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 PRPF39Q86UA1 669 aaKnown RBP17.11■□□□□ 0.33
TSC2-201ENST00000219476 HPDLQ96IR7 371 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 CDK5RAP1Q96SZ6 601 aaKnown RBP17.11■□□□□ 0.33
TSC2-201ENST00000219476 DDIT4Q9NX09 232 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 TAF4O00268 1085 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 AMHP03971 560 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 PRDX5P30044 214 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 TRIP10Q15642 601 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 MDM1Q8TC05 714 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 ATP6V1G3Q96LB4 118 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 AIFM3Q96NN9 605 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 RBM15Q96T37 977 aaKnown RBP eCLIP17.11■□□□□ 0.33
TSC2-201ENST00000219476 MBD2Q9UBB5 411 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 UBQLN1Q9UMX0 589 aaKnown RBP17.11■□□□□ 0.33
TSC2-201ENST00000219476 NR2E3Q9Y5X4 410 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 CCNIQ14094 377 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 VAV3Q9UKW4 847 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 RBMXL2O75526 392 aaKnown RBP17.11■□□□□ 0.33
TSC2-201ENST00000219476 CD2BP2O95400 341 aaKnown RBP17.11■□□□□ 0.33
TSC2-201ENST00000219476 RAG1P15918 1043 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 FDFT1P37268 417 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 ARF5P84085 180 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 TXNRD1Q16881 649 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 MIR1-1HGQ9H1L0 117 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 RHBGQ9H310 441 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 PRR12Q9ULL5 1215 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 USP18Q9UMW8 372 aa17.11■□□□□ 0.33
TSC2-201ENST00000219476 SF3B1O75533 1304 aaKnown RBP eCLIP17.1■□□□□ 0.335e-6■■■■■ 104.7
TSC2-201ENST00000219476 PLA2G6O60733 806 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 THOP1P52888 689 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 COPZ1P61923 177 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 DENND1BQ6P3S1 775 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 RDM1Q8NG50 284 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.1■□□□□ 0.33
TSC2-201ENST00000219476 TRIM43BA6NCK2 446 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 CCNG1P51959 295 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 MARSP56192 900 aaKnown RBP17.1■□□□□ 0.33
TSC2-201ENST00000219476 C21orf59P57076 290 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 ATP2C1P98194 919 aaPredicted RBP17.1■□□□□ 0.33
TSC2-201ENST00000219476 PRKCEQ02156 737 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 ATP6AP1LQ52LC2 224 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 C12orf60Q5U649 245 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 LRRC49Q8IUZ0 686 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 GPT2Q8TD30 523 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 KAT2BQ92831 832 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 DSEQ9UL01 958 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 DUSP12Q9UNI6 340 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 PTCH1Q13635 1447 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 SLC12A8A0AV02 714 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 ESYT3A0FGR9 886 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 MEI4A8MW99 385 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 ATP6V1B2P21281 511 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 GEMIN4P57678 1058 aaKnown RBP17.1■□□□□ 0.33
TSC2-201ENST00000219476 EFEMP1Q12805 493 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 ZSWIM7Q19AV6 140 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 ZNF57Q68EA5 555 aaPredicted RBP17.1■□□□□ 0.33
TSC2-201ENST00000219476 ZNF786Q8N393 782 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 SLC44A5Q8NCS7 719 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 PDGFCQ9NRA1 345 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 TMEM39AQ9NV64 488 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 DPP3Q9NY33 737 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 FAM50BQ9Y247 325 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 SLC9A8Q9Y2E8 581 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 AXIN2Q9Y2T1 843 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 MTO1Q9Y2Z2 717 aaKnown RBP17.1■□□□□ 0.33
TSC2-201ENST00000219476 HEG1Q9ULI3 1381 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 NMT2O60551 498 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 PHF2O75151 1096 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 HSPA13P48723 471 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 NRG3P56975 720 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 TRIM16LQ309B1 348 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 NDUFAF6Q330K2 333 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 IKBIPQ70UQ0 350 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 PIGBQ92521 554 aa17.1■□□□□ 0.33
TSC2-201ENST00000219476 CCDC126Q96EE4 140 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms