RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 DYRK1BQ9Y463 629 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 SALL1Q9NSC2 1324 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 NCOA3Q9Y6Q9 1424 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 ERVK-10P10266 1014 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 KCNT1Q5JUK3 1230 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 C16orf87Q6PH81 154 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 CHMP1BQ7LBR1 199 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 HORMAD1Q86X24 394 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 XPO6Q96QU8 1125 aaKnown RBP19.6■□□□□ 0.73
SMPD3-201ENST00000219334 TIMM13Q9Y5L4 95 aaPredicted RBP19.6■□□□□ 0.73
SMPD3-201ENST00000219334 FAM205AQ6ZU69 1335 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 AIM2O14862 343 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 CAND2O75155 1236 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 TRIM16O95361 564 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 CENPAP49450 140 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 ERVK-9P63128 1117 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 ERVK-24P63145 666 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 BTKQ06187 659 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 CDC16Q13042 620 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 SDR42E2A6NKP2 422 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 TRIM49D1C9J1S8 452 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 SEC24DO94855 1032 aaPredicted RBP19.59■□□□□ 0.73
SMPD3-201ENST00000219334 CCR1P32246 355 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 GPATCH2LQ9NWQ4 482 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 SUPT7LO94864 414 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 SHMT1P34896 483 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 GPC1P35052 558 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 MDH1P40925 334 aaKnown RBP19.59■□□□□ 0.73
SMPD3-201ENST00000219334 IQSEC1Q6DN90 963 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 TPCN2Q8NHX9 752 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 MYCBPQ99417 103 aaPredicted RBP19.59■□□□□ 0.73
SMPD3-201ENST00000219334 POP1Q99575 1024 aaKnown RBP19.59■□□□□ 0.73
SMPD3-201ENST00000219334 PPP1R37O75864 691 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 TFDP3Q5H9I0 405 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 ANKS6Q68DC2 871 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 TAS1R2Q8TE23 839 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 SKA1Q96BD8 255 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 CELF4Q9BZC1 486 aaKnown RBP19.59■□□□□ 0.73
SMPD3-201ENST00000219334 FBXL21Q9UKT6 434 aa19.59■□□□□ 0.73
SMPD3-201ENST00000219334 MAP3K6O95382 1288 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 RAD23BP54727 409 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 SGCGQ13326 291 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 TMCO5AQ8N6Q1 288 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 NAT9Q9BTE0 207 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 LRRC40Q9H9A6 602 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 TRPV2Q9Y5S1 764 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 C16orf96A6NNT2 1141 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 ANKRD65E5RJM6 399 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 PPM1LQ5SGD2 360 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 KHDRBS2Q5VWX1 349 aaKnown RBP19.58■□□□□ 0.73
SMPD3-201ENST00000219334 ZNF410Q86VK4 478 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 MTO1Q9Y2Z2 717 aaKnown RBP19.58■□□□□ 0.73
SMPD3-201ENST00000219334 JCHAINP01591 159 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 RFX3P48380 749 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 RENBPP51606 427 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 LVRNQ6Q4G3 990 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 CCDC126Q96EE4 140 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 FAM167BQ9BTA0 163 aa19.58■□□□□ 0.73
SMPD3-201ENST00000219334 CARNS1A5YM72 827 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 UBXN8O00124 270 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 IFRD1O00458 451 aaPredicted RBP19.58■□□□□ 0.72
SMPD3-201ENST00000219334 TIMM44O43615 452 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 TBC1D4O60343 1298 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 PSMA3P25788 255 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 POTEAQ6S8J7 498 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 NT5MQ9NPB1 228 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 UXTQ9UBK9 157 aaPredicted RBP19.58■□□□□ 0.72
SMPD3-201ENST00000219334 NRXN1Q9ULB1 1477 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 MSCO60682 206 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 CABYRO75952 493 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 GZMAP12544 262 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 SCNN1BP51168 640 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 MYBPC2Q14324 1141 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 CCNI2Q6ZMN8 369 aaPredicted RBP19.58■□□□□ 0.72
SMPD3-201ENST00000219334 LRRC6Q86X45 466 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 SLC20A1Q8WUM9 679 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 HPS4Q9NQG7 708 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 RRN3Q9NYV6 651 aa19.58■□□□□ 0.72
SMPD3-201ENST00000219334 AKAP5P24588 427 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 SOX11P35716 441 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 C10orf53Q8N6V4 93 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 UTP6Q9NYH9 597 aaKnown RBP19.57■□□□□ 0.72
SMPD3-201ENST00000219334 SMARCAL1Q9NZC9 954 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 BARX2Q9UMQ3 279 aaPredicted RBP19.57■□□□□ 0.72
SMPD3-201ENST00000219334 IGFBP4P22692 258 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 TGM3Q08188 693 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 IKBKEQ14164 716 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 C2CD6Q53TS8 623 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 AGBL2Q5U5Z8 902 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 GRAMD4Q6IC98 578 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 CSGALNACT1Q8TDX6 532 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 CCDC3Q9BQI4 270 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 USP18Q9UMW8 372 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 MAPK1P28482 360 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 TBX4P57082 545 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 CHI3L2Q15782 390 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 SLC30A10Q6XR72 485 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 MMGT1Q8N4V1 131 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 DIS3LQ8TF46 1054 aaKnown RBP19.57■□□□□ 0.72
SMPD3-201ENST00000219334 RXFP2Q8WXD0 754 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms